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7541por Ristov, Strahil, Brajkovic, Vladimir, Cubric-Curik, Vlatka, Michieli, Ivan, Curik, Ino“…RESULTS: We present MaGelLAn 1.0 (maternal genealogy lineage analyser), a suite of four Python scripts (modules) that is designed to facilitate the analysis of the impact of mitogenome polymorphism on quantitative trait variation by combining molecular and pedigree information. …”
Publicado 2016
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7542por Lucey, Noelle M., Lombardi, Chiara, Florio, Maurizio, DeMarchi, Lucia, Nannini, Matteo, Rundle, Simon, Gambi, Maria Cristina, Calosi, Piero“…(Annelida, Serpulidae, Spirorbinae): one residing in low pH and the other from a nearby ambient (i.e. high) pH site. We measured a suite of fitness‐related traits (i.e. survival, reproductive output, maturation, population growth) and tube growth rates in laboratory‐bred F2 generation individuals from both populations reciprocally transplanted back into both ambient and low‐pH in situ habitats. …”
Publicado 2016
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7543“…The first workflow utilizes Tuxedo (Tophat, Cufflink, Cuffmerge and Cuffdiff suite of tools). The second workflow deploys Trinity for de novo assembly and uses RSEM for transcript quantification and EdgeR for differential analysis. …”
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7544por Baker, Jarrad K., Long, Sara M., Hassell, Kathryn L., Pettigrove, Vincent J., Gagnon, Marthe M.“…To assess the current health status of the fish inhabiting the Bay, a follow up survey was conducted in 2015. A suite of biomarkers of exposure and effects were measured to determine the health status of Port Phillip Bay sand flathead (Platycephalus bassensis), namely ethoxyresorufin-O-deethylase (EROD) activity, polycyclic aromatic hydrocarbons (PAH) biliary metabolites, carboxylesterase activity (CbE) and DNA damage (8-oxo-dG). …”
Publicado 2016
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7545“…The genome has a comprehensive nif gene suite for nitrogen fixation, supporting previous observations of nitrogenase activity. …”
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7546“…RESULTS: We identified a comprehensive suite of circadian clock gene homologues in T. saltator including the ‘core’ clock genes period (Talper), cryptochrome 2 (Talcry2), timeless (Taltim), clock (Talclk), and bmal1 (Talbmal1). …”
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7547“…We demonstrate that increased investment towards traits such as growth and reproductive effort were often associated with the expression of a greater number of genes with similar effect, thus providing a suite of candidate genes for future research in this and other invertebrate organisms. …”
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7548por Xiong, Zijun, Li, Fang, Li, Qiye, Zhou, Long, Gamble, Tony, Zheng, Jiao, Kui, Ling, Li, Cai, Li, Shengbin, Yang, Huanming, Zhang, Guojie“…BACKGROUND: Geckos are among the most species-rich reptile groups and the sister clade to all other lizards and snakes. Geckos possess a suite of distinctive characteristics, including adhesive digits, nocturnal activity, hard, calcareous eggshells, and a lack of eyelids. …”
Publicado 2016
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7549por Studer, Anthony J., Schnable, James C., Weissmann, Sarit, Kolbe, Allison R., McKain, Michael R., Shao, Ying, Cousins, Asaph B., Kellogg, Elizabeth A., Brutnell, Thomas P.“…Expression profiles of transcription factors along developing leaves of D. oligosanthes and S. viridis were compared with previously published data from S. bicolor, Zea mays, and Oryza sativa to identify a small suite of transcription factors that likely acquired functions specifically related to C(4) photosynthesis. …”
Publicado 2016
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7550“…Considering the array of functions that RAP are associated with, from capacitance, through to storage, and long-distance water transport, deciding how their role in defense fits into this suite of functions is a challenge for plant scientists, and likely depends on a range of factors. …”
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7551por Gkorezis, Panagiotis, Daghio, Matteo, Franzetti, Andrea, Van Hamme, Jonathan D., Sillen, Wouter, Vangronsveld, Jaco“…Bacterially driven PHC bioremediation is attributed to the presence of diverse suites of metabolic genes for aliphatic and aromatic hydrocarbons, along with a broader suite of physiological properties including biosurfactant production, biofilm formation, chemotaxis to hydrocarbons, and flexibility in cell-surface hydrophobicity. …”
Publicado 2016
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7552por Guan, Rui, Zhao, Yunpeng, Zhang, He, Fan, Guangyi, Liu, Xin, Zhou, Wenbin, Shi, Chengcheng, Wang, Jiahao, Liu, Weiqing, Liang, Xinming, Fu, Yuanyuan, Ma, Kailong, Zhao, Lijun, Zhang, Fumin, Lu, Zuhong, Lee, Simon Ming-Yuen, Xu, Xun, Wang, Jian, Yang, Huanming, Fu, Chengxin, Ge, Song, Chen, Wenbin“…(Ginkgoaceae) is one of the most distinctive plants. It possesses a suite of fascinating characteristics including a large genome, outstanding resistance/tolerance to abiotic and biotic stresses, and dioecious reproduction, making it an ideal model species for biological studies. …”
Publicado 2016
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7553“…LifeWatchGreece is one of these nodes where a portal was developed offering access to a suite of virtual laboratories and e-services. NEW INFORMATION: Despite its strict definition in information technology, in practice "portal" is a fairly broad term that embraces many web architectures. …”
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7554por Grimm, Fabian A., Iwata, Yasuhiro, Sirenko, Oksana, Chappell, Grace A., Wright, Fred A., Reif, David M., Braisted, John, Gerhold, David L., Yeakley, Joanne M., Shepard, Peter, Seligmann, Bruce, Roy, Tim, Boogaard, Peter J., Ketelslegers, Hans B., Rohde, Arlean M., Rusyn, Ivan“…Here, we present a comprehensive experimental and computational approach to categorize UVCBs according to global similarities in their bioactivity using a suite of in vitro models. We used petroleum substances, an important group of UVCBs which are grouped for regulatory approval and read-across primarily on physico-chemical properties and the manufacturing process, and only partially based on toxicity data, as a case study. …”
Publicado 2016
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7555“…In the system, B. terrae BS001 apparently perceived the presence of the fungal hyphae already at the early experimental stages (T1, T2), by strongly upregulating a suite of chemotaxis and flagellar motility genes. …”
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7556por Aken, Bronwen L., Achuthan, Premanand, Akanni, Wasiu, Amode, M. Ridwan, Bernsdorff, Friederike, Bhai, Jyothish, Billis, Konstantinos, Carvalho-Silva, Denise, Cummins, Carla, Clapham, Peter, Gil, Laurent, Girón, Carlos García, Gordon, Leo, Hourlier, Thibaut, Hunt, Sarah E., Janacek, Sophie H., Juettemann, Thomas, Keenan, Stephen, Laird, Matthew R., Lavidas, Ilias, Maurel, Thomas, McLaren, William, Moore, Benjamin, Murphy, Daniel N., Nag, Rishi, Newman, Victoria, Nuhn, Michael, Ong, Chuang Kee, Parker, Anne, Patricio, Mateus, Riat, Harpreet Singh, Sheppard, Daniel, Sparrow, Helen, Taylor, Kieron, Thormann, Anja, Vullo, Alessandro, Walts, Brandon, Wilder, Steven P., Zadissa, Amonida, Kostadima, Myrto, Martin, Fergal J., Muffato, Matthieu, Perry, Emily, Ruffier, Magali, Staines, Daniel M., Trevanion, Stephen J., Cunningham, Fiona, Yates, Andrew, Zerbino, Daniel R., Flicek, Paul“…Our extensive data resources include evidence-based gene and regulatory region annotation, genome variation and gene trees. An accompanying suite of tools, infrastructure and programmatic access methods ensure uniform data analysis and distribution for all supported species. …”
Publicado 2017
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7557“…The analysis was then extended to a network meta-analysis, which consists of direct and indirect evidence in a network of antibiotics trials, using a suite of multivariate meta-analysis routines of STATA (mvmeta command). …”
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7558“…Here, we re-sequence 17 VRs and perform a suite of selection and demographic analyses in sympatric populations of two species of mouse lemurs (Microcebus murinus and M. ravelobensis) in northwestern Madagascar. …”
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7559por Jackson, Richard G, Patel, Rashmi, Jayatilleke, Nishamali, Kolliakou, Anna, Ball, Michael, Gorrell, Genevieve, Roberts, Angus, Dobson, Richard J, Stewart, Robert“…OBJECTIVES: We sought to use natural language processing to develop a suite of language models to capture key symptoms of severe mental illness (SMI) from clinical text, to facilitate the secondary use of mental healthcare data in research. …”
Publicado 2017
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7560“…The present study examined this possibility by having 22 participants listen to two types of a 400-s musical excerpt of French Suite No. 5 by J. S. Bach (on cembalo, 24-bit quantization, 192 kHz A/D sampling), with or without inaudible high-frequency components, while performing a visual vigilance task. …”
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