A novel exosome-derived prognostic signature and risk stratification for breast cancer based on multi-omics and systematic biological heterogeneity

por Long, Fei, Ma, Haodong, Hao, Youjin, Tian, Luyao, Li, Yinghong, Li, Bo, Chen, Juan, Tang, Ying, Li, Jing, Deng, Lili, Xie, Guoming, Liu, Mingwei
Publicado 2023

Heat shock proteins and metal ions – Reaction or interaction?

por Szebesczyk, Agnieszka, Słowik, Joanna
Publicado 2023

3plex enables deep computational investigation of triplex forming lncRNAs

por Cicconetti, Chiara, Lauria, Andrea, Proserpio, Valentina, Masera, Marco, Tamburrini, Annalaura, Maldotti, Mara, Oliviero, Salvatore, Molineris, Ivan
Publicado 2023

Advances in sequencing-based studies of microDNA and ecDNA: Databases, identification methods, and integration with single-cell analysis

por Jiang, Rong, Yang, Manqiu, Zhang, Shufan, Huang, Moli
Publicado 2023

Multi-omics in Crohn's disease: New insights from inside

por Mu, Chenlu, Zhao, Qianjing, Zhao, Qing, Yang, Lijiao, Pang, Xiaoqi, Liu, Tianyu, Li, Xiaomeng, Wang, Bangmao, Fung, Shan-Yu, Cao, Hailong
Publicado 2023

i4mC-GRU: Identifying DNA N(4)-Methylcytosine sites in mouse genomes using bidirectional gated recurrent unit and sequence-embedded features

por Nguyen-Vo, Thanh-Hoang, Trinh, Quang H., Nguyen, Loc, Nguyen-Hoang, Phuong-Uyen, Rahardja, Susanto, Nguyen, Binh P.
Publicado 2023

Structural basis of the farnesoid X receptor/retinoid X receptor heterodimer on inverted repeat DNA

por Jiang, Longying, Liu, Xueke, Liang, Xujun, Dai, Shuyan, Wei, Hudie, Guo, Ming, Chen, Zhuchu, Xiao, Desheng, Chen, Yongheng
Publicado 2023

DriverGenePathway: Identifying driver genes and driver pathways in cancer based on MutSigCV and statistical methods

por Xu, Xiaolu, Qi, Zitong, Zhang, Dawei, Zhang, Meiwei, Ren, Yonggong, Geng, Zhaohong
Publicado 2023

A diazotrophy-ammoniotrophy dual growth model for the sulfate reducing bacterium Desulfovibrio vulgaris var. Hildenborough

por Darnajoux, Romain, Inomura, Keisuke, Zhang, Xinning
Publicado 2023

CNNSplice: Robust models for splice site prediction using convolutional neural networks

por Akpokiro, Victor, Chowdhury, H. M. A. Mohit, Olowofila, Samuel, Nusrat, Raisa, Oluwadare, Oluwatosin
Publicado 2023

Rational design, synthesis and structural characterization of peptides and peptidomimetics to target Hsp90/Cdc37 interaction for treating hepatocellular carcinoma

por Sukumaran, Surya, Tan, Mingdian, Ben-Uliel, Shulamit Fluss, Zhang, Hui, De Zotti, Marta, Chua, Mei-Sze, So, Samuel K., Qvit, Nir
Publicado 2023

Computational identification of differentially-expressed genes as suggested novel COVID-19 biomarkers: A bioinformatics analysis of expression profiles

por Di Salvatore, Valentina, Crispino, Elena, Maleki, Avisa, Nicotra, Giulia, Russo, Giulia, Pappalardo, Francesco
Publicado 2023

Current progress in artificial intelligence-assisted medical image analysis for chronic kidney disease: A literature review

por Zhao, Dan, Wang, Wei, Tang, Tian, Zhang, Ying-Ying, Yu, Chen
Publicado 2023

What remains from living cells in bacterial lysate-based cell-free systems

por Wagner, Léa, Jules, Matthieu, Borkowski, Olivier
Publicado 2023

Machine learning classification of plant genotypes grown under different light conditions through the integration of multi-scale time-series data

por Sakeef, Nazmus, Scandola, Sabine, Kennedy, Curtis, Lummer, Christina, Chang, Jiameng, Uhrig, R. Glen, Lin, Guohui
Publicado 2023

Unique features of the TCR repertoire of reactivated memory T cells in the experimental mouse tumor model

por Kalinina, Anastasiia, Persiyantseva, Nadezda, Britanova, Olga, Lupyr, Ksenia, Shagina, Irina, Khromykh, Ludmila, Kazansky, Dmitry
Publicado 2023

Optimized cell type signatures revealed from single-cell data by combining principal feature analysis, mutual information, and machine learning

por Caliskan, Aylin, Caliskan, Deniz, Rasbach, Lauritz, Yu, Weimeng, Dandekar, Thomas, Breitenbach, Tim
Publicado 2023

Theoretical and experimental studies on the interaction of biphenyl ligands with human and murine PD-L1: Up-to-date clues for drug design

por Donati, Greta, D’Amore, Vincenzo Maria, Russomanno, Pasquale, Cerofolini, Linda, Amato, Jussara, Marzano, Simona, Salobehaj, Maria, Rizzo, Domenico, Assoni, Giulia, Carotenuto, Alfonso, La Pietra, Valeria, Arosio, Daniela, Seneci, Pierfausto, Fragai, Marco, Brancaccio, Diego, Di Leva, Francesco Saverio, Marinelli, Luciana
Publicado 2023

Impact of Cuproptosis-related markers on clinical status, tumor immune microenvironment and immunotherapy in colorectal cancer: A multi-omic analysis

por Shao, Yanfei, Fan, Xiaodong, Yang, Xiao, Li, Shuchun, Huang, Ling, Zhou, Xueliang, Zhang, Sen, Zheng, Minhua, Sun, Jing
Publicado 2023

Systems crosstalk between antiviral response and cancerous pathways via extracellular vesicles in HIV-1-associated colorectal cancer

por Chen, Zimei, Yang, Ke, Zhang, Jiayi, Ren, Shufan, Chen, Hui, Guo, Jiahui, Cui, Yizhi, Wang, Tong, Wang, Min
Publicado 2023