Mycobacterium tuberculosis-dependent Monocyte Expression Quantitative Trait Loci and Tuberculosis Pathogenesis

por Hong, Hyejeong, Dill-McFarland, Kimberly A., Simmons, Jason D., Peterson, Glenna J., Benchek, Penelope, Mayanja-Kizza, Harriet, Boom, W. Henry, Stein, Catherine M., Hawn, Thomas R.
Publicado 2023

A practical solution for preserving single cells for RNA sequencing

por Attar, Moustafa, Sharma, Eshita, Li, Shuqiang, Bryer, Claire, Cubitt, Laura, Broxholme, John, Lockstone, Helen, Kinchen, James, Simmons, Alison, Piazza, Paolo, Buck, David, Livak, Kenneth J., Bowden, Rory
Publicado 2018

Sex- and Dose-Specific Effects of Maternal Bisphenol A Exposure on Pancreatic Islets of First- and Second-Generation Adult Mice Offspring

por Bansal, Amita, Rashid, Cetewayo, Xin, Frances, Li, Changhong, Polyak, Erzsebet, Duemler, Anna, van der Meer, Tom, Stefaniak, Martha, Wajid, Sana, Doliba, Nicolai, Bartolomei, Marisa S., Simmons, Rebecca A.
Publicado 2017

Systematic assessment of tissue dissociation and storage biases in single-cell and single-nucleus RNA-seq workflows

por Denisenko, Elena, Guo, Belinda B., Jones, Matthew, Hou, Rui, de Kock, Leanne, Lassmann, Timo, Poppe, Daniel, Clément, Olivier, Simmons, Rebecca K., Lister, Ryan, Forrest, Alistair R. R.
Publicado 2020

Targeted Discovery of Glycoside Hydrolases from a Switchgrass-Adapted Compost Community

por Allgaier, Martin, Reddy, Amitha, Park, Joshua I., Ivanova, Natalia, D'haeseleer, Patrik, Lowry, Steve, Sapra, Rajat, Hazen, Terry C., Simmons, Blake A., VanderGheynst, Jean S., Hugenholtz, Philip
Publicado 2010

A Quantitative Chemotherapy Genetic Interaction Map Reveals Factors Associated with PARP Inhibitor Resistance

por Hu, Hsien-Ming, Zhao, Xin, Kaushik, Swati, Robillard, Lilliane, Barthelet, Antoine, Lin, Kevin K., Shah, Khyati N., Simmons, Andy D., Raponi, Mitch, Harding, Thomas C., Bandyopadhyay, Sourav
Publicado 2018

Disorientation effects, circulating small ribonucleic acid, and genetic susceptibility on static postural stability

por Turner, Ashley, Markey, Michael, Le, Peter, Reiter, Ali, Cox, Cyndy, Simmons, Stacy, Rao, M.B., Altman, Lorenna, Davis, Kermit, Huber, Dustin, Dufour, Jonathan S., Marras, William, Bhattacharya, Amit
Publicado 2023

Embryonic Stem Cell-Derived Neurons as a Model System for Epigenome Maturation during Development

por Martin, Sally, Poppe, Daniel, Olova, Nelly, O’Leary, Conor, Ivanova, Elena, Pflueger, Jahnvi, Dechka, Jennifer, Simmons, Rebecca K., Cooper, Helen M., Reik, Wolf, Lister, Ryan, Wolvetang, Ernst J.
Publicado 2023

TOLLIP deficiency is associated with increased resistance to Legionella pneumophila pneumonia

por Shah, Javeed A., Emery, Robyn, Lee, Brian, Venkatasubramanian, Sambasivan, Simmons, Jason D., Brown, Melanie, Hung, Chi F., Prins, Jan M., Verbon, Annelies, Hawn, Thomas R., Skerrett, Shawn J.
Publicado 2019

The regulatory network for petal anthocyanin pigmentation is shaped by the MYB5a/NEGAN transcription factor in Mimulus

por Zheng, Xingyu, Om, Kuenzang, Stanton, Kimmy A, Thomas, Daniel, Cheng, Philip A, Eggert, Allison, Simmons, Emily, Yuan, Yao-Wu, Conradi Smith, Gregory D, Puzey, Joshua R, Cooley, Arielle M
Publicado 2021

Genomics Characterization of an Engineered Corynebacterium glutamicum in Bioreactor Cultivation Under Ionic Liquid Stress

por Banerjee, Deepanwita, Eng, Thomas, Sasaki, Yusuke, Srinivasan, Aparajitha, Oka, Asun, Herbert, Robin A., Trinh, Jessica, Singan, Vasanth R., Sun, Ning, Putnam, Dan, Scown, Corinne D., Simmons, Blake, Mukhopadhyay, Aindrila
Publicado 2021

A muscle cell‐macrophage axis involving matrix metalloproteinase 14 facilitates extracellular matrix remodeling with mechanical loading

por Peck, Bailey D., Murach, Kevin A., Walton, R. Grace, Simmons, Alexander J., Long, Douglas E., Kosmac, Kate, Dungan, Cory M., Kern, Philip A., Bamman, Marcas M., Peterson, Charlotte A.
Publicado 2022

Tuberculosis severity associates with variants and eQTLs related to vascular biology and infection-induced inflammation

por McHenry, Michael L., Simmons, Jason, Hong, Hyejeong, Malone, LaShaunda L., Mayanja-Kizza, Harriet, Bush, William S., Boom, W. Henry, Hawn, Thomas R., Williams, Scott M., Stein, Catherine M.
Publicado 2023

Massively parallel in vivo Perturb-seq reveals cell type-specific transcriptional networks in cortical development

por Zheng, Xinhe, Wu, Boli, Liu, Yuejia, Simmons, Sean K., Kim, Kwanho, Clarke, Grace S., Ashiq, Abdullah, Park, Joshua, Wang, Zhilin, Tong, Liqi, Wang, Qizhao, Xu, Xiangmin, Levin, Joshua Z., Jin, Xin
Publicado 2023

Koala retrovirus viral load and disease burden in distinct northern and southern koala populations

por Sarker, Nishat, Fabijan, Jessica, Owen, Helen, Seddon, Jennifer, Simmons, Greg, Speight, Natasha, Kaler, Jasmeet, Woolford, Lucy, Emes, Richard David, Hemmatzadeh, Farhid, Trott, Darren J., Meers, Joanne, Tarlinton, Rachael Eugenie
Publicado 2020

Genome sequence and description of the anaerobic lignin-degrading bacterium Tolumonas lignolytica sp. nov.

por Billings, Andrew F., Fortney, Julian L., Hazen, Terry C., Simmons, Blake, Davenport, Karen W., Goodwin, Lynne, Ivanova, Natalia, Kyrpides, Nikos C., Mavromatis, Konstantinos, Woyke, Tanja, DeAngelis, Kristen M.
Publicado 2015

Bovine spongiform encephalopathy: the effect of oral exposure dose on attack rate and incubation period in cattle – an update

por Konold, Timm, Arnold, Mark E, Austin, Anthony R, Cawthraw, Saira, Hawkins, Steve AC, Stack, Michael J, Simmons, Marion M, Sayers, A Robin, Dawson, Michael, Wilesmith, John W, Wells, Gerald AH
Publicado 2012

Expression profiling of cutaneous squamous cell carcinoma with perineural invasion implicates the p53 pathway in the process

por Warren, Timothy A., Broit, Natasa, Simmons, Jacinta L., Pierce, Carly J., Chawla, Sharad, Lambie, Duncan L. J., Quagliotto, Gary, Brown, Ian S., Parsons, Peter G., Panizza, Benedict J., Boyle, Glen M.
Publicado 2016

Sirt3 Promotes Chondrogenesis, Chondrocyte Mitochondrial Respiration and the Development of High‐Fat Diet‐Induced Osteoarthritis in Mice

por Zhu, Shouan, Donovan, Elise L., Makosa, Dawid, Mehta‐D'souza, Padmaja, Jopkiewicz, Anita, Batushansky, Albert, Cortassa, Dominic, Simmons, Aaron D., Lopes, Erika Barboza Prado, Kinter, Michael, Griffin, Timothy M.
Publicado 2022

ELF5 and DOK7 regulation in anti-estrogen treated cells and tumors

por Fitzgerald, Lily M., Browne, Eva P., Christie, Kevin D., Punska, Elizabeth C., Simmons, Leo O., Williams, Kristin E., Pentecost, Brian T., M. Jawale, Rahul, Otis, Christopher N., Arcaro, Kathleen F.
Publicado 2016