Multivalent DNA and nucleosome acidic patch interactions specify VRK1 mitotic localization and activity

por Budziszewski, Gabrielle R, Zhao, Yani, Spangler, Cathy J, Kedziora, Katarzyna M, Williams, Michael R, Azzam, Dalal N, Skrajna, Aleksandra, Koyama, Yuka, Cesmat, Andrew P, Simmons, Holly C, Arteaga, Eyla C, Strauss, Joshua D, Kireev, Dmitri, McGinty, Robert K
Publicado 2022

Ecological constraints on highly evolvable olfactory receptor genes and morphology in neotropical bats

por Yohe, Laurel R., Fabbri, Matteo, Lee, Daniela, Davies, Kalina T. J., Yohe, Thomas P., Sánchez, Miluska K. R., Rengifo, Edgardo M., Hall, Ronald P., Mutumi, Gregory, Hedrick, Brandon P., Sadier, Alexa, Simmons, Nancy B., Sears, Karen E., Dumont, Elizabeth, Rossiter, Stephen J., Bhullar, Bhart‐Anjan S., Dávalos, Liliana M.
Publicado 2022

Estrogen-related receptor gamma regulates mitochondrial and synaptic genes and modulates vulnerability to synucleinopathy

por Fox, S. N., McMeekin, L. J., Savage, C. H., Joyce, K. L., Boas, S. M., Simmons, M. S., Farmer, C. B., Ryan, J., Pereboeva, L., Becker, K., Auwerx, J., Sudarshan, S., Ma, J., Lee, A., Roberts, R. C., Crossman, D. K., Kralli, A., Cowell, R. M.
Publicado 2022

Statement on how to interpret the QPS qualification on ‘acquired antimicrobial resistance genes’

por Koutsoumanis, Konstantinos, Allende, Ana, Alvarez‐Ordóñez, Avelino, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Nonno, Romolo, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Suarez, Juan Evaristo, Fernández, Estefania Noriega, Istace, Frédérique, Aguillera, Jaime, Brozzi, Rosella, Liébana, Ernesto, Guerra, Beatriz, Correia, Sandra, Herman, Lieve
Publicado 2023

Antimicrobial Resistance Genes, Cassettes, and Plasmids Present in Salmonella enterica Associated With United States Food Animals

por McMillan, Elizabeth A., Gupta, Sushim K., Williams, Laura E., Jové, Thomas, Hiott, Lari M., Woodley, Tiffanie A., Barrett, John B., Jackson, Charlene R., Wasilenko, Jamie L., Simmons, Mustafa, Tillman, Glenn E., McClelland, Michael, Frye, Jonathan G.
Publicado 2019

Carriage and Gene Content Variability of the pESI-Like Plasmid Associated with Salmonella Infantis Recently Established in United States Poultry Production

por McMillan, Elizabeth A., Wasilenko, Jamie L., Tagg, Kaitlin A., Chen, Jessica C., Simmons, Mustafa, Gupta, Sushim K., Tillman, Glenn E., Folster, Jason, Jackson, Charlene R., Frye, Jonathan G.
Publicado 2020

Control of inducible gene expression links cohesin to hematopoietic progenitor self-renewal and differentiation

por Cuartero, Sergi, Weiss, Felix D., Dharmalingam, Gopuraja, Guo, Ya, Ing-Simmons, Elizabeth, Masella, Silvia, Robles-Rebollo, Irene, Xiao, Xiaolin, Wang, Yi-Fang, Barozzi, Iros, Djeghloul, Dounia, Amano, Mariane T., Niskanen, Henri, Petretto, Enrico, Dowell, Robin D., Tachibana, Kikuë, Kaikkonen, Minna U., Nasmyth, Kim A., Lenhard, Boris, Natoli, Gioacchino, Fisher, Amanda G., Merkenschlager, Matthias
Publicado 2018

Developmental Regulation of Genes Encoding Universal Stress Proteins in Schistosoma mansoni

por Isokpehi, Raphael D., Mahmud, Ousman, Mbah, Andreas N., Simmons, Shaneka S., Avelar, Lívia, Rajnarayanan, Rajendram V., Udensi, Udensi K., Ayensu, Wellington K., Cohly, Hari H., Brown, Shyretha D., Dates, Centdrika R., Hentz, Sonya D., Hughes, Shawntae J., Smith-McInnis, Dominique R., Patterson, Carvey O., Sims, Jennifer N., Turner, Kelisha T., Williams, Baraka S., Johnson, Matilda O., Adubi, Taiwo, Mbuh, Judith V., Anumudu, Chiaka I., Adeoye, Grace O., Thomas, Bolaji N., Nashiru, Oyekanmi, Oliveira, Guilherme
Publicado 2011

Genomic organization, evolution, and expression of photoprotein and opsin genes in Mnemiopsis leidyi: a new view of ctenophore photocytes

por Schnitzler, Christine E, Pang, Kevin, Powers, Meghan L, Reitzel, Adam M, Ryan, Joseph F, Simmons, David, Tada, Takashi, Park, Morgan, Gupta, Jyoti, Brooks, Shelise Y, Blakesley, Robert W, Yokoyama, Shozo, Haddock, Steven HD, Martindale, Mark Q, Baxevanis, Andreas D
Publicado 2012

Identification of candidate genes and pathways in retinopathy of prematurity by whole exome sequencing of preterm infants enriched in phenotypic extremes

por Kim, Sang Jin, Sonmez, Kemal, Swan, Ryan, Campbell, J. Peter, Ostmo, Susan, Chan, R. V. Paul, Nagiel, Aaron, Drenser, Kimberly A., Berrocal, Audina M., Horowitz, Jason D., Li, Xiaohui, Chen, Yii-Der Ida, Taylor, Kent D., Simmons, Charles, Rotter, Jerome I., Chiang, Michael F.
Publicado 2021

Development and evaluation of a real‐time polymerase chain reaction assay for the rapid detection of Talaromyces marneffei MP1 gene in human plasma

por Hien, Ha Thuc Ai, Thanh, Tran Tan, Thu, Nguyen Thi Mai, Nguyen, Ashley, Thanh, Nguyen Tat, Lan, Nguyen Phu Huong, Simmons, Cameron, Shikuma, Cecilia, Chau, Nguyen Van Vinh, Thwaites, Guy, Le, Thuy
Publicado 2016

Characterization of tumor mutation burden, PD-L1 and DNA repair genes to assess relationship to immune checkpoint inhibitors response in metastatic renal cell carcinoma

por Labriola, Matthew Kyle, Zhu, Jason, Gupta, Rajan, McCall, Shannon, Jackson, Jennifer, Kong, Eric F, White, James R, Cerqueira, Gustavo, Gerding, Kelly, Simmons, John K, George, Daniel, Zhang, Tian
Publicado 2020

Effect of parental origin of damaging variants in pro-angiogenic genes on fetal growth in patients with congenital heart defects: Data and analyses

por Russell, Mark W., Moldenhauer, Julie S., Rychik, Jack, Burnham, Nancy B., Zullo, Erin, Parry, Samuel I., Simmons, Rebecca A., Elovitz, Michal A., Nicolson, Susan C., Linn, Rebecca L., Johnson, Mark P., Yu, Sunkyung, Sampson, Matthew G., Hakonarson, Hakon, Gaynor, J. William
Publicado 2019

Mutational disruption of the ABCC2 gene in fall armyworm, Spodoptera frugiperda, confers resistance to the Cry1Fa and Cry1A.105 insecticidal proteins

por Flagel, Lex, Lee, Young Wha, Wanjugi, Humphrey, Swarup, Shilpa, Brown, Alana, Wang, Jinling, Kraft, Edward, Greenplate, John, Simmons, Jeni, Adams, Nancy, Wang, Yanfei, Martinelli, Samuel, Haas, Jeffrey A., Gowda, Anilkumar, Head, Graham
Publicado 2018

Comprehensive NGS profiling to enable detection of ALK gene rearrangements and MET amplifications in non-small cell lung cancer

por Clavé, Sergi, Jackson, Jennifer B., Salido, Marta, Kames, Jacob, Gerding, Kelly M. R., Verner, Ellen L., Kong, Eric F., Weingartner, Elizabeth, Gibert, Joan, Hardy-Werbin, Max, Rocha, Pedro, Riera, Xènia, Torres, Erica, Hernandez, James, Cerqueira, Gustavo, Nichol, Donna, Simmons, John, Taus, Álvaro, Pijuan, Lara, Bellosillo, Beatriz, Arriola, Edurne
Publicado 2023

Genome engineering for estrogen receptor mutations reveals differential responses to anti-estrogens and new prognostic gene signatures for breast cancer

por Harrod, Alison, Lai, Chun-Fui, Goldsbrough, Isabella, Simmons, Georgia M., Oppermans, Natasha, Santos, Daniela B., Győrffy, Balazs, Allsopp, Rebecca C., Toghill, Bradley J., Balachandran, Kirsty, Lawson, Mandy, Morrow, Christopher J., Surakala, Manasa, Carnevalli, Larissa S., Zhang, Pei, Guttery, David S., Shaw, Jacqueline A., Coombes, R. Charles, Buluwela, Lakjaya, Ali, Simak
Publicado 2022

Aegilops sharonensis genome-assisted identification of stem rust resistance gene Sr62

por Yu, Guotai, Matny, Oadi, Champouret, Nicolas, Steuernagel, Burkhard, Moscou, Matthew J., Hernández-Pinzón, Inmaculada, Green, Phon, Hayta, Sadiye, Smedley, Mark, Harwood, Wendy, Kangara, Ngonidzashe, Yue, Yajuan, Gardener, Catherine, Banfield, Mark J., Olivera, Pablo D., Welchin, Cole, Simmons, Jamie, Millet, Eitan, Minz-Dub, Anna, Ronen, Moshe, Avni, Raz, Sharon, Amir, Patpour, Mehran, Justesen, Annemarie F., Jayakodi, Murukarthick, Himmelbach, Axel, Stein, Nils, Wu, Shuangye, Poland, Jesse, Ens, Jennifer, Pozniak, Curtis, Karafiátová, Miroslava, Molnár, István, Doležel, Jaroslav, Ward, Eric R., Reuber, T. Lynne, Jones, Jonathan D. G., Mascher, Martin, Steffenson, Brian J., Wulff, Brande B. H.
Publicado 2022

Feedforward regulation of Myc coordinates lineage-specific with housekeeping gene expression during B cell progenitor cell differentiation

por Ferreirós-Vidal, Isabel, Carroll, Thomas, Zhang, Tianyi, Lagani, Vincenzo, Ramirez, Ricardo N., Ing-Simmons, Elizabeth, Gómez-Valadés, Alicia G., Cooper, Lee, Liang, Ziwei, Papoutsoglou, Georgios, Dharmalingam, Gopuraja, Guo, Ya, Tarazona, Sonia, Fernandes, Sunjay J., Noori, Peri, Silberberg, Gilad, Fisher, Amanda G., Tsamardinos, Ioannis, Mortazavi, Ali, Lenhard, Boris, Conesa, Ana, Tegner, Jesper, Merkenschlager, Matthias, Gomez-Cabrero, David
Publicado 2019

A first-in-human phase I/IIa gene transfer clinical trial for Duchenne muscular dystrophy using rAAVrh74.MCK.GALGT2

por Flanigan, Kevin M., Vetter, Tatyana A., Simmons, Tabatha R., Iammarino, Megan, Frair, Emma C., Rinaldi, Federica, Chicoine, Louis G., Harris, Johan, Cheatham, John P., Cheatham, Sharon L., Boe, Brian, Waldrop, Megan A., Zygmunt, Deborah A., Packer, Davin, Martin, Paul T.
Publicado 2022

Genome-wide association study implicates immune activation of multiple integrin genes in inflammatory bowel disease

por de Lange, Katrina M., Moutsianas, Loukas, Lee, James C., Lamb, Christopher A., Luo, Yang, Kennedy, Nicholas A., Jostins, Luke, Rice, Daniel L., Gutierrez-Achury, Javier, Ji, Sun-Gou, Heap, Graham, Nimmo, Elaine R., Edwards, Cathryn, Henderson, Paul, Mowat, Craig, Sanderson, Jeremy, Satsangi, Jack, Simmons, Alison, Wilson, David C., Tremelling, Mark, Hart, Ailsa, Mathew, Christopher G., Newman, William G., Parkes, Miles, Lees, Charlie W., Uhlig, Holm, Hawkey, Chris, Prescott, Natalie J., Ahmad, Tariq, Mansfield, John C., Anderson, Carl A., Barrett, Jeffrey C.
Publicado 2017