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1441por Czauderna, Carolin, Poplawski, Alicia, O’Rourke, Colm J., Castven, Darko, Pérez-Aguilar, Benjamín, Becker, Diana, Heilmann-Heimbach, Stephanie, Odenthal, Margarete, Amer, Wafa, Schmiel, Marcel, Drebber, Uta, Binder, Harald, Ridder, Dirk A., Schindeldecker, Mario, Straub, Beate K., Galle, Peter R., Andersen, Jesper B., Thorgeirsson, Snorri S., Park, Young Nyun, Marquardt, Jens U.“…Associated early alterations identified by Ingenuity Pathway Analysis (IPA) involved apoptosis, immune regulation, and stemness pathways, while late changes centered on cell survival, proliferation, and invasion. …”
Publicado 2021
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1442“…We used a data set comprising 1,149 fully sequenced individuals from the German population, subsetting the SNPs to approximate the Illumina Infinium-Omni5 array. Five hundred fifty-three thousand two hundred and thirty-four SNPs across two selected chromosomes were utilized for comparison between imputed and sequenced genotypes. …”
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1443“…We compared MHC class IIa haplotypes determined by Sanger sequence-based genotyping of 135 individuals to their SNP profiles generated using the Ovine Infinium HD BeadChip. A panel of 11 SNPs could reliably determine MHC diplotypes, and two additional SNPs within the DQA1 gene enabled detection of a recombinant haplotype affecting only the SNPs downstream of the expressed genes. …”
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1444por Almerekova, Shyryn, Genievskaya, Yuliya, Abugalieva, Saule, Sato, Kazuhiro, Turuspekov, Yerlan“…Two different approaches were employed in the analysis: (1) the accessions from Kazakhstan were compared with barley samples from six different regions around the world using 1955 polymorphic SNPs, and (2) 94 accessions collected from six breeding programs from Kazakhstan were studied using 5636 polymorphic SNPs using a 9K Illumina Infinium assay. In the first approach, the neighbor-joining tree showed that the majority of the accessions from Kazakhstan were grouped in a separate subcluster with a common ancestral node; there was a sister subcluster that comprised mainly barley samples that originated in Europe. …”
Publicado 2021
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1445por van den Berg, Inge, Smid, Marcel, Coebergh van den Braak, Robert R. J., van de Wiel, Mark A., van Deurzen, Carolien H. M., de Weerd, Vanja, Martens, John W. M., IJzermans, Jan N. M., Wilting, Saskia M.“…Methylation profiles were obtained using the Infinium HumanMethylation450 BeadChip. We performed adaptive group‐regularized logistic ridge regression with post hoc group‐weighted elastic net marker selection to build prediction models for classification of CMS2 and CMS3. …”
Publicado 2021
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1446por Um, Ji-Young, Chung, Bo-Young, Kim, Han-Bi, Kim, Jin-Cheol, Park, Chun-Wook, Kim, Hye-One“…DNA methylation of AhRR was performed by Infinium Human Methylation450 BeadChip in PBMC of psoriasis patients and methylation-specific PCR (MSP) in HaCaT cells. …”
Publicado 2021
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1447por Fisher, Jonah, Mitchell, Colter, Meier, Helen, Crimmins, Eileen, Thyagarajan, Bharat, Faul, Jessica“…DNAm was measured using the Infinium Methylation EPIC BeadChip. All 4 phenotypes had significant associations (FDR < 0.05) with many methylation sites (packyears=6859, smoking duration=6572, start age=11374, quit age=773). …”
Publicado 2021
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1448por Bauer, Michael A., Todorova, Valentina K., Stone, Annjanette, Carter, Weleetka, Plotkin, Matthew D., Hsu, Ping-Ching, Wei, Jeanne Y., Su, Joseph L., Makhoul, Issam“…DNA methylation of PBMCs from 9 patients with abnormal LVEF and 10 patients with normal LVEF were examined using Infinium HumanMethylation450 BeadChip. We have identified 14,883 differentially methylated CpGs at baseline and 18,718 CpGs after the first cycle of chemotherapy, which significantly correlated with LVEF status. …”
Publicado 2021
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1449por Gaponenko, Iaroslav, Cherifi-Hertel, Salia, Acevedo-Salas, Ulises, Bassiri-Gharb, Nazanin, Paruch, Patrycja“…The wealth of properties in functional materials at the nanoscale has attracted tremendous interest over the last decades, spurring the development of ever more precise and ingenious characterization techniques. In ferroelectrics, for instance, scanning probe microscopy based techniques have been used in conjunction with advanced optical methods to probe the structure and properties of nanoscale domain walls, revealing complex behaviours such as chirality, electronic conduction or localised modulation of mechanical response. …”
Publicado 2022
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1450“…Animal genotyping was performed using Ovine Infinium HD BeadChip 600K DNA, association search was performed using PLINK v. 1.07 software. …”
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1451por Arneson, Adriana, Haghani, Amin, Thompson, Michael J., Pellegrini, Matteo, Kwon, Soo Bin, Vu, Ha, Maciejewski, Emily, Yao, Mingjia, Li, Caesar Z., Lu, Ake T., Morselli, Marco, Rubbi, Liudmilla, Barnes, Bret, Hansen, Kasper D., Zhou, Wanding, Breeze, Charles E., Ernst, Jason, Horvath, Steve“…Infinium methylation arrays are not available for the vast majority of non-human mammals. …”
Publicado 2022
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1452por Bejaoui, Yosra, Razzaq, Aleem, Yousri, Noha A., Oshima, Junko, Megarbane, Andre, Qannan, Abeer, Potabattula, Ramya, Alam, Tanvir, Martin, George M., Horn, Henning F., Haaf, Thomas, Horvath, Steve, El Hajj, Nady“…In this study, we performed the first genome‐wide methylation analysis on blood DNA of 15 patients with progeroid laminopathies using Infinium Methylation EPIC arrays including 8 patients with classical HGPS. …”
Publicado 2022
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1453“…Interestingly, tumor cells too, have devised ingenious ways to use the mitochondrial DNA mediated cGAS-STING-IRF3 response to promote neoplastic transformations and develop tumor micro-environments. …”
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1454por Polinski, Kristen J, Putnick, Diane L, Robinson, Sonia L, Schliep, Karen C, Silver, Robert M, Guan, Weihua, Schisterman, Enrique F, Mumford, Sunni L, Yeung, Edwina H“…DNAm was measured by the Infinium MethylationEPIC BeadChip. Multivariable robust linear regression was used to assess associations of perceived stress with individual CpG probes. …”
Publicado 2022
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1455“…To evaluate the potential utility of ulcWGS, we performed a whole-genome sequencing (WGS) of 72 European individuals to a target coverage of 0.4× and compared its performance with the widely used Infinium Global Screening Multi-Disease Array (GSA-MD). …”
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1456“…With the development of this field, multiple ingenious modification methods have been developed to obtain engineered EVs with desired performance. …”
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1457por Liu, Jingjing, Wu, Yuduo, Sun, Hairui, Liu, Xiaowei, Gu, Xiaoyan, Zhao, Ying, Zhang, Ye, Han, Jiancheng, He, Yihua“…To identify differential methylation sites (DMSs) and regions (DMRs) in cases vs. controls, an Infinium Human Methylation 850 k bead chip was used. …”
Publicado 2022
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1458por Bariana, Harbans S., Babu, Prashanth, Forrest, Kerrie L., Park, Robert F., Bansal, Urmil K.“…Bulked segregant analysis using the 90K Infinium SNP array located LrAW2 in the long arm of chromosome 2B. …”
Publicado 2022
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1459“…There are various types of complex puzzle locks, and the mechanism designs are quite ingenious and interesting, which shows the extraordinary technique and ingenuity of the ancient craftsmen.…”
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1460por Kisielnicka, Anna, Sobalska-Kwapis, Marta, Purzycka-Bohdan, Dorota, Nedoszytko, Bogusław, Zabłotna, Monika, Seweryn, Michał, Strapagiel, Dominik, Nowicki, Roman J., Reich, Adam, Samotij, Dominik, Szczęch, Justyna, Krasowska, Dorota, Bartosińska, Joanna, Narbutt, Joanna, Lesiak, Aleksandra, Barasińska, Paulina, Owczarczyk-Saczonek, Agnieszka, Czerwińska, Joanna, Szepietowski, Jacek C., Batycka-Baran, Aleksandra, Czajkowski, Rafał, Górecka-Sokołowska, Magdalena, Rudnicka, Lidia, Czuwara, Joanna, Szczerkowska-Dobosz, Aneta“…DNA samples were genotyped for over 500,000 single nucleotide polymorphisms (SNPs) using Infinium CoreExome BeadChips (Illumina, San Diego, CA, USA). …”
Publicado 2022
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