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1561por LING, SHIZHANG, RETTIG, ELENI M., TAN, MARIETTA, CHANG, XIAOFEI, WANG, ZHIMING, BRAIT, MARIANA, BISHOP, JUSTIN A., FERTIG, ELANA J., CONSIDINE, MICHAEL, WICK, MICHAEL J., HA, PATRICK K.“…These xenografts were then evaluated for genome-wide DNA methylation patterns using the Illumina Infinium HumanMethylation27 BeadChip array. Validation of the 32 candidate genes was performed by bisulfite sequencing (BS-seq) in a separate cohort of 6 ACC primary tumors and 6 normal control salivary gland tissues. …”
Publicado 2016
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1562por McCallie, Blair R., Parks, Jason C., Patton, Alyssa L., Griffin, Darren K., Schoolcraft, William B., Katz-Jaffe, Mandy G.“…DNA methylation analysis was performed using the Illumina Infinium HumanMethylation450 BeadChip (~485,000 CpG sites). …”
Publicado 2016
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1563por Walker, Rosie May, Sussmann, Jessika Elizabeth, Whalley, Heather Clare, Ryan, Niamh Margaret, Porteous, David John, McIntosh, Andrew Mark, Evans, Kathryn Louise“…METHODS: DNA methylation profiles were obtained from whole‐blood samples from 22 IL and 23 WL individuals using the Infinium HumanMethylation450 BeadChip. Differential methylation was assessed on a single‐locus and regional basis. …”
Publicado 2016
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1564por Levinson, Rebecca T., Hulgan, Todd, Kalams, Spyros A., Fessel, Joshua P., Samuels, David C.“…Mitochondrial haplogroups were defined from mitochondrial DNA variants genotyped on the Illumina 660W or Illumina Infinium Human-Exome Beadchip. Sex and date of birth were extracted from the EMR. …”
Publicado 2016
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1565por Zhang, Yang, Zhang, Xin-ran, Park, Jong-lyul, Kim, Jong-hwan, Zhang, Lian, Ma, Jun-ling, Liu, Wei-dong, Deng, Da-jun, You, Wei-cheng, Kim, Yong-sung, Pan, Kai-feng“…EXPERIMENTAL DESIGN: Infinium HumanMethylation 450K BeadChip was used to compare methylation profiles prior to and after eradication treatment. …”
Publicado 2016
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1566por Burri, Andrea, Marinova, Zoya, Robinson, Mark D., Kühnel, Brigitte, Waldenberger, Melanie, Wahl, Simone, Kunze, Sonja, Gieger, Christian, Livshits, Gregory, Williams, Frances“…Epigenome-wide analysis of DNA methylation was conducted using the Illumina Infinium HumanMethylation 450 DNA BeadChip in both the discovery and replication sample. …”
Publicado 2016
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1567por Chen, Jianli, Guttieri, Mary J., Zhang, Junli, Hole, David, Souza, Edward, Goates, Blair“…The population was genotyped with the Diversity Arrays Technology (DArT) and the Illumina Infinium 9K iSelect marker platforms. A total of three QTL were detected, and resistant alleles were from IDO444. …”
Publicado 2016
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1568por Yeung, Kit San, Chung, Brian Hon-Yin, Choufani, Sanaa, Mok, Mo Yin, Wong, Wai Lap, Mak, Christopher Chun Yu, Yang, Wanling, Lee, Pamela Pui Wah, Wong, Wilfred Hing Sang, Chen, Yi-an, Grafodatskaya, Daria, Wong, Raymond Woon Sing, Lau, Chak Sing, Chan, Daniel Tak Mao, Weksberg, Rosanna, Lau, Yu-Lung“…Using a genome-wide DNA methylation microarray, the Illumina Infinium HumanMethylation450 BeadChip, we compared the methylation levels of CpG sites in DNA extracted from white blood cells from 12 female Chinese SLE patients and 10 healthy female controls. …”
Publicado 2017
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1569por Ramalho-Carvalho, João, Graça, Inês, Gomez, Antonio, Oliveira, Jorge, Henrique, Rui, Esteller, Manel, Jerónimo, Carmen“…METHODS: Differential methylation mapping in prostate tissues was carried using Infinium HumanMethylation450 BeadChip. After validation of methylation and expression analyses in a larger series of prostate tissues, the functional role of the cluster miR-130b~301b was explored using in vitro studies testing cell viability, apoptosis, invasion and DNA damage in prostate cancer cell lines. …”
Publicado 2017
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1570por Liu, Kun, Zhang, Yuening, Zhang, Chengdong, Zhang, Qinle, Li, Jiatong, Xiao, Feifan, Li, Yingfang, Zhang, Ruoheng, Dou, Dongwei, Liang, Jiezhen, Qin, Jian, Lin, Zhidi, Zhao, Dong, Jiang, Min, Liang, Zhenxin, Su, Jie, Gupta, Vanaparthy Pranay, He, Min, Yang, Xiaoli“…We have assessed the global genomic DNA methylation profiles in human HCC patients by using the Infinium Human Methylation27 BeadChip. A CpG loci of S100A8 was found to be significantly hypomethylated in HCC. …”
Publicado 2016
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1571por Crujeiras, A. B., Diaz-Lagares, A., Sandoval, J., Milagro, F. I., Navas-Carretero, S., Carreira, M. C., Gomez, A., Hervas, D., Monteiro, M. P., Casanueva, F. F., Esteller, M., Martinez, J. A.“…DNA samples isolated from subcutaneous adipose tissue and circulating leukocytes were hybridized in the Infinium HumanMethylation 450 BeadChip. Data were compared between samples from obese (n = 45) and non-obese (n = 8–10) patients by Wilcoxon-rank test, unadjusted for cell type distributions. …”
Publicado 2017
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1572por Howard, Nicholas P, van de Weg, Eric, Bedford, David S, Peace, Cameron P, Vanderzande, Stijn, Clark, Matthew D, Teh, Soon Li, Cai, Lichun, Luby, James J“…A multi-family based dense and high-quality integrated SNP map was created using the apple 8 K Illumina Infinium SNP array. This map was used alongside a large pedigree-connected data set from the RosBREED project to build extended SNP haplotypes and to identify pedigree relationships. …”
Publicado 2017
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1573por Tang, Qiuqiong, Holland-Letz, Tim, Slynko, Alla, Cuk, Katarina, Marme, Frederik, Schott, Sarah, Heil, Jörg, Qu, Bin, Golatta, Michael, Bewerunge-Hudler, Melanie, Sutter, Christian, Surowy, Harald, Wappenschmidt, Barbara, Schmutzler, Rita, Hoth, Markus, Bugert, Peter, Bartram, Claus R., Sohn, Christof, Schneeweiss, Andreas, Yang, Rongxi, Burwinkel, Barbara“…Epigenome-wide DNA methylation profiling on blood DNA from BC cases and healthy controls was performed by applying Infinium HumanMethylation450K BeadChips. Promising CpG sites were selected and validated in three independent larger sample cohorts via MassARRAY EpiTyper assays. …”
Publicado 2016
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1574por Marinova, Zoya, Maercker, Andreas, Küffer, Andreas, Robinson, Mark D., Wojdacz, Tomasz K., Walitza, Susanne, Grünblatt, Edna, Burri, Andrea“…DNA was isolated from epithelial buccal cells and hybridized to the Illumina Infinium 450 k DNA methylation array, which provides coverage of 485,000 methylation sites. …”
Publicado 2017
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1575“…DNA was extracted from leukocytes, and DNA methylation was measured with the Infinium 450K BeadChip. In total, 46 CRC cases and 140 controls from the screening setting and 93 CRC cases from the clinical setting were measured. …”
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1576por Trimarchi, Michael P., Yan, Pearlly, Groden, Joanna, Bundschuh, Ralf, Goodfellow, Paul J.“…Publically available Infinium HumanMethylation 450 data from The Cancer Genome Atlas (TCGA) were compared to MethylCap-seq data. …”
Publicado 2017
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1577por Strand, Siri H., Switnicki, Michal, Moller, Mia, Haldrup, Christa, Storebjerg, Tine M., Hedegaard, Jakob, Nordentoft, Iver, Hoyer, Soren, Borre, Michael, Pedersen, Jakob S., Wild, Peter J., Park, Jong Y., Orntoft, Torben F., Sorensen, Karina D.“…Experimental design: Eight novel candidate markers, COL4A6, CYBA, TCAF1 (FAM115A), HLF, LINC01341 (LOC149134), LRRC4, PROM1, and RHCG, were selected from Illumina Infinium HumanMethylation450 BeadChip analysis of 21 tumor (T) and 21 non-malignant (NM) prostate specimens. …”
Publicado 2016
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1578por Liu, Xiang-Yu, Cen, Pei-Pei, Wu, Li-Zhou, Li, Fei-Fei, Song, Wei-Ming, Xie, Gang, Chen, San-Ping“…This work presents a rational strategy to fine-tune the magnetic interactions and further magnetization dynamics of the Mn(III)-containing dinuclear units through small structural variations driven by the ingenious chemistry.…”
Publicado 2017
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1579por Espinal, Allyson C., Wang, Dan, Yan, Li, Liu, Song, Tang, Li, Hu, Qiang, Morrison, Carl D., Ambrosone, Christine B., Higgins, Michael J., Sucheston-Campbell, Lara E.“…MATERIALS AND METHODS: Restored FFPE and matched FF samples were profiled using the Illumina Infinium HumanMethylation450K platform. Methylation levels (β-values) across all loci and the top 100 loci previously shown to differentiate tumors by estrogen receptor status (ER+ or ER−) in a larger FF study, were compared between matched FF and FFPE samples using Pearson's correlation, hierarchical clustering and WCGNA. …”
Publicado 2017
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1580por Quek, Kelly, Li, Jun, Estecio, Marcos, Zhang, Jiexin, Fujimoto, Junya, Roarty, Emily, Little, Latasha, Chow, Chi-Wan, Song, Xingzhi, Behrens, Carmen, Chen, Taiping, William, William N., Swisher, Stephen, Heymach, John, Wistuba, Ignacio, Zhang, Jianhua, Futreal, Andrew, Zhang, Jianjun“…In this study, we generated methylation profiles of 48 spatially separated tumor regions from 11 localized lung adenocarcinomas and their matched normal lung tissues using Illumina Infinium Human Methylation 450K BeadChip array. We observed methylation ITH within the same tumors, but to a much less extent compared to inter-individual heterogeneity. …”
Publicado 2017
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