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  1. 4801
    “…The de novo assemblies of pooled reads from all treatments reconstructed ~54,000 transcripts using Trinity, and ~31,000 transcripts using ABySS. Comparison to the strain CCMP 1984 genome showed that the majority of the gene models were present in both de novo assemblies and that roughly 95% of contigs from both assemblies mapped to the genome, with Trinity capturing slightly more genome content. …”
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    De novo assembly of Aureococcus anophagefferens transcriptomes reveals diverse responses to the low nutrient and low light conditions present during blooms
  2. 4802
    “…Avoiding looking into the abyss may reduce anxiety in both conditions; exploration of the “vertical strip” in the heading direction is beneficial for visual control of balance and avoidance of obstacles during locomotion.…”
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    Visual Exploration during Locomotion Limited by Fear of Heights
  3. 4803
    “…We de novo assembled these reads using Trans-ABySS to reconstruct reference transcriptomes, obtaining over 350,000 and 130,000 putative transcripts for R. catesbeiana and X. laevis, respectively. …”
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    De novo Transcriptome Assemblies of Rana (Lithobates) catesbeiana and Xenopus laevis Tadpole Livers for Comparative Genomics without Reference Genomes
  4. 4804
    “…Sealer is available for download at https://github.com/bcgsc/abyss/tree/sealer-release. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12859-015-0663-4) contains supplementary material, which is available to authorized users.…”
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    Sealer: a scalable gap-closing application for finishing draft genomes
  5. 4805
    “…To address this problem, we developed a pipeline named InteMAP to integrate three assemblers, ABySS, IDBA-UD and CABOG, which were found to complement each other in assembling metagenomic sequences. …”
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    InteMAP: Integrated metagenomic assembly pipeline for NGS short reads
  6. 4806
    “…Glyceridae (Annelida) are a group of venomous annelids distributed worldwide from intertidal to abyssal depths. To trace the evolutionary history and complexity of glycerid venom cocktails, a solid backbone phylogeny of this group is essential. …”
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    The Utility of Genome Skimming for Phylogenomic Analyses as Demonstrated for Glycerid Relationships (Annelida, Glyceridae)
  7. 4807
    “…Bioinformatic analyses based on three state-of-the-art assemblers, the CLC Genomic Workbench, Trans-ABySS, and Trinity, that use single and multiple k-mer methods respectively, were used to analyse the data. …”
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    Optimizing Hybrid de Novo Transcriptome Assembly and Extending Genomic Resources for Giant Freshwater Prawns (Macrobrachium rosenbergii): The Identification of Genes and Markers Associated with Reproduction
  8. 4808
    “…At the 97% similarity level, sequence-abundant taxa were not trench-specific and were related to those found in other hadal and abyssal habitats, indicating potential connectivity between geographically isolated sediments. …”
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    Microbial Community Diversity Within Sediments from Two Geographically Separated Hadal Trenches
  9. 4809
    “…In addition, we showed that Bridger and BinPacker harbored the shortest runtimes followed by SOAPdenovo and Trans-ABySS. CONCLUSIONS: The present study compares the performance of five representative transcript assemblers and investigates the key factors that affect the assembly quality of the transcriptome of the tea plants. …”
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    Optimized sequencing depth and de novo assembler for deeply reconstructing the transcriptome of the tea plant, an economically important plant species
  10. 4810
    “…Long-chain acyl-coenzyme A synthetases (LACSs) catalyze the synthesis of long-chain acyl-coenzyme A, which is one of the primary substrates for TAG synthesis. …”
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    Long-chain acyl-CoA synthetase 2 is involved in seed oil production in Brassica napus
  11. 4811
    “…Long-chain acyl-CoA synthetases (LACSs) play diversified roles in the synthesis of cutin, wax, and triacylglycerol (TAG). …”
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    Molecular Cloning and Functional Analysis of GmLACS2-3 Reveals Its Involvement in Cutin and Suberin Biosynthesis along with Abiotic Stress Tolerance
  12. 4812
    “…Batoids, distributed from shallow to abyssal depths, are considerably vulnerable to anthropogenic threats. …”
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    Differences in the occurrence and abundance of batoids across an oceanic archipelago using complementary data sources: Implications for conservation
  13. 4813
    “…Although the continental slope and abyss comprise the largest habitat on earth, the absence of documented fish sounds from deep waters is striking. …”
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    An investigation of bubble resonance and its implications for sound production by deep-water fishes
  14. 4814
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    Outcome After Intestinal Transplantation From Living Versus Deceased Donors: A Propensity-matched Cohort Analysis of the International Intestinal Transplant Registry
  15. 4815
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    2258. "Identification of Respiratory Viral Pathogens Using Real-Time PCR Was Not Associated with Reduced Antibiotic Use During the COVID-19 Pandemic, but Displayed Viral-Viral Interactions"
  16. 4816
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    Silencing of the XAF1 gene by promoter hypermethylation in cancer cells and reactivation to TRAIL-sensitization by IFN-β
  17. 4817
    “…L’insuffisance cardiaque était constante chez tous les patients avec deux cas de tamponnade à l’admission ayant nécessité une ponction péricardique d’urgence. …”
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    Les péricardites tuberculeuses au centre hospitalier universitaire de Bobo-Dioulasso, Burkina Faso
  18. 4818
    “…Les facteurs de bon pronostic à long terme ont été l’âge jeune, un GCS supérieur à 12 à l'admission, et la trépanoponction suivie de l'exérèse da la coque. …”
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    Abcès encéphaliques: prise en charge, à propos d'une série de 82 cas
  19. 4819
    “…RÉSULTATS: Durant la période d’étude, 59 patients avaient présenté à l'admission un syndrome coronaire aigu, soit une prévalence hospitalière de 4,05%. …”
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    Les syndromes coronaires aigus à Dakar: aspects cliniques thérapeutiques et évolutifs
  20. 4820
    “…Nous avons analysé les données démographiques, cliniques, biologiques, et thérapeutiques de nos patients à l'admission et au cours de leurs hospitalisations. 48 épisodes d'infections urinaires chez 43 patients ont été colligés dont 3 enfants. …”
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    Les infections urinaires chez les patients insuffisants rénaux chroniques hospitalisés au service de néphrologie: profil bactériologique et facteurs de risque
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