“…AVAILABILITY AND IMPLEMENTATION: SubRecon is platform independent, requiring Java v1.8 or above. Source code, installation instructions and an example dataset are freely available under the Apache 2.0 license at https://github.com/chrismonit/SubRecon.…”
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“…EpiLog is freely available on the web at http://epilog-tool.org. It is implemented in Java (version ≥1.7 required) and the source code is provided at https://github.com/epilog-tool/epilog under a GNU General Public License v3.0.…”
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“…SugarSketcher is an intuitive and fast JavaScript interface module for online drawing of glycan structures in the popular Symbol Nomenclature for Glycans (SNFG) notation and exporting them to various commonly used formats encoding carbohydrate sequences (e.g., GlycoCT) or quality images (e.g., svg). …”
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“…It is freely available as supplementary data online at MDPI.com and has been developed using ImageJ, a free image processing program that can run on any computer with a Java virtual machine, which is distributed for Windows, Mac, and Linux. …”
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“…Here we use ocean-atmosphere-land satellite observations to reveal the dominant contribution of the MC monsoonal water cycle to boreal winter−spring freshening in the Java Sea through local precipitation and runoff from Kalimantan, Indonesia. …”
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“…Here, we present VOLPES (volpes.univie.ac.at), a user-friendly web server and the corresponding JavaScript library that enable a fully interactive, multifunctional visualization, analysis and comparison of the physicochemical properties of protein and nucleic-acid sequences, allowing unprecedented insight into biological sequence data and creating a starting point for further in-depth exploration.…”
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“…The honeycomb waste was obtained from beekeeping at Lawang-Malang, East Java, Indonesia. Electrochemical and scanning electron microscopy methods were used to investigate the performance of the corrosion inhibition process. …”
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“…To further allow scientists programmatic access to ClueGO with R, Python, JavaScript etc., we implemented the cyREST API into ClueGO. …”
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“…AVAILABILITY AND IMPLEMENTATION: GenomeWarp is written in Java. All source code and the user manual are freely available at https://github.com/verilylifesciences/genomewarp. …”
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“…The first set of pairs connects snippets of source code in C, C++, Java, and Python with their corresponding comments, which are extracted using Doxygen. …”
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“…Features of the STCSB include the following: (1) a cross-platform application running on a Java virtual machine; (2) handling hierarchical XML-based data formats such as the protein data bank markup language (PDBML); (3) prepared application programming interfaces (APIs) with both character user interface (CUI) and graphical user interface (GUI) options; (4) prepared APIs for molecular graphics; and (5) a scalable source code based on the Model-View-Controller (MVC) architectural pattern.…”
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“…In adjusted Poisson regression analysis, older age, being unmarried, separated, divorced or widowed, residing in Java and major island groups, poor cognitive functioning, loneliness, and functional disability were associated with frailty. …”
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“…New passive- and active-source seismic experiments reveal unusually high mantle P-wave speeds that extend beneath the remnants of the world’s largest known large igneous province, making up the 120-million-year-old Ontong-Java-Manihiki-Hikurangi Plateau. Sub-Moho P(n) phases of ~8.8 ± 0.2 km/s are resolved with negligible azimuthal seismic anisotropy, but with strong radial anisotropy (~10%), characteristic of aggregates of olivine with an AG crystallographic fabric. …”
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“…Design and Methods: The stratified random sampling method was used to obtain data from 152 children in 4 villages in Surabaya, East Java, Indonesia. Results: The results showed that children under the age of five, experience higher stunting duration and longer frequency of diarrhea. …”
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“…To achieve this we developed svmPSF: an open-source Java-based framework compatible with ImageJ. The approach takes a series of point response measurements across the field-of-view (FOV) and applies principal component analysis to the measurements' co-variance matrix to generate a PSF model. …”
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“…The developed system is implemented in Java for Android-based mobile devices and successfully tested. …”
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“…Fabric pores are treated as image particles and analyzed with the Java-based image processing software ImageJ. The obtained data relate to the constructional parameters of the fabric that allow for further analysis, provide the possibility to compare structurally similar or different samples as well as double check the results generated by optical or other means. …”
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“…Based on our constructed pairwise sequence alignment algorithm component library and the convenient software platform PAR, a few expansion domain components are developed for multiple sequence alignment application domain, and specific multiple sequence alignment algorithm can be designed, and its corresponding program, i.e., C++/Java/Python program, can be generated efficiently and thus enables the improvement of the development efficiency of complex algorithms, as well as accuracy of sequence alignment calculation. …”
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“…Methods: The model was tested empirically using the data of 115 persons with schizophrenia from Central Java Province, Indonesia. The Calgary Depression Scale for Schizophrenia, Schizophrenia Hope Scale-9, and Recovery Assessment Scale were used to measure participants' depression, hope, and recovery, respectively. …”
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“…A cross-sectional study was conducted in Sukabumi and Waled, West Java involving 2 years old infants born from the mothers participated in previous cohort. …”
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