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  1. 4481
    “…We present here ROMA (Representation and quantification Of Module Activities) Java software, designed for fast and robust computation of the activity of gene sets (or modules) with coordinated expression. …”
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    ROMA: Representation and Quantification of Module Activity from Target Expression Data
  2. 4482
    “…In order to serve the scientific community, we developed a web server, mobile app and JAVA-based standalone software (http://crdd.osdd.net/raghava/hemopi/).…”
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    A Web Server and Mobile App for Computing Hemolytic Potency of Peptides
  3. 4483
    “…METHODS: The ‘early infant diagnosis (EID) Follow-up System’ was designed as a tool for reminding the field level staff for follow-up of HIV-exposed babies. Using Java Swing Framework, software was developed which generates automatic advance SMS alerts regarding patient information to the Counsellor of the respective Integrated Counselling and Testing Center and district supervisor, 7 days prior to due dates. …”
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    Use of technology in follow-up of HIV positive pregnant women and their babies till 18 months of age- an innovation by Maharashtra State AIDS Control Society (MSACS), India
  4. 4484
    “…By following moving duck flock farmers over a period of 6 months in Java, Indonesia, we were able to describe the movement of flocks and to characterise the network of various types of actors associated with the production system. …”
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    Who Is Spreading Avian Influenza in the Moving Duck Flock Farming Network of Indonesia?
  5. 4485
    “…Our package also includes Cytoscape, a java-based platform with a graphical user interface for visualizing and analyzing gene networks, and the CyNetworkBMA app, a Cytoscape app that allows the use of networkBMA via the user-friendly Cytoscape interface.…”
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    GUIdock: Using Docker Containers with a Common Graphics User Interface to Address the Reproducibility of Research
  6. 4486
    “…GapBlaster was developed via Java programming language. The software uses contigs obtained in the assembly of the genome to perform an alignment against a draft of the genome/scaffold, using BLAST or Mummer to close gaps. …”
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    GapBlaster—A Graphical Gap Filler for Prokaryote Genomes
  7. 4487
    “…The interface was created using custom HTML5 and JavaScript code, and data analysis was performed using R. …”
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    Use of Mechanical Turk as a MapReduce Framework for Macular OCT Segmentation
  8. 4488
    por Li, Yupeng, Jackson, Scott A.
    Publicado 2016
    “…RESULTS: The platform implements the jQuery and vis.js JavaScript libraries, so that users are able to interactively visualize and edit the gene network, and easily access the information about the network, e.g. gene lists, gene interactions and gene functional annotations. …”
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    Crowdsourcing the nodulation gene network discovery environment
  9. 4489
    por Holm, Liisa, Laakso, Laura M.
    Publicado 2016
    “…Structural superimpositions are visualized using the Java-free WebGL viewer PV. The structural alignment view is enhanced by sequence similarity searches against Uniprot. …”
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    Dali server update
  10. 4490
    “…Hence, we describe the development and utility of MFPPI V.1.0 (a web interface developed in JAVA platform) to input each FASTA sequence from Multi-FASTA file into the ProtParam web server for the calculation of physico-chemical properties. …”
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    MFPPI – Multi FASTA ProtParam Interface
  11. 4491
    “…The method is scripted in Java to process BS-Seq mapping results. Through a simple data uploading process, the TEA server deploys a web-based platform for deep analysis by linking data to an updated Arabidopsis annotation database and toolkits. …”
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    TEA: the epigenome platform for Arabidopsis methylome study
  12. 4492
    “…METHODS: RevManHAL was created in Java using NetBeans by a programmer working full time for 2 months. …”
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    RevManHAL: towards automatic text generation in systematic reviews
  13. 4493
    por Ezra Tsur, Elishai
    Publicado 2017
    “…The proposed framework was implemented using Java as the development environment, EclipseLink as the data persistency agent and Apache Derby as the database manager. …”
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    Rapid development of entity-based data models for bioinformatics with persistence object-oriented design and structured interfaces
  14. 4494
    “…Flexible search and data visualization interfaces enable easy access to the data via internet (https://gabi.rzpd.de/PoMaMo.html). The Java servlet tool YAMB (Yet Another Map Browser) was designed to interactively display chromosomal maps. …”
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    PoMaMo—a comprehensive database for potato genome data
  15. 4495
    “…Alternatively, users can examine entire partial genome datasets on the basis of relative expression of gene objects or by the use of an interactive Java-based tool (SimiTri), which displays sequence similarity relationships for a large number of sequence objects in a single graphic. …”
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    PartiGeneDB—collating partial genomes
  16. 4496
    “…Its natural habitat are sulfuric hot springs and geysers found near volcanic areas in, e.g., Yellowstone National Park in the USA and in Java, Indonesia. It grows optimally at a pH between 0.5 and 3.0 and at temperatures up to 56 °C. …”
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    Thermostable phycocyanin from the red microalga Cyanidioschyzon merolae, a new natural blue food colorant
  17. 4497
    “…AVAILABILITY AND IMPLEMENTATION: The proposed PF is implemented in JAVA and can be downloaded from https://github.com/mgledi/PhyFoo SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.…”
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    Unrealistic phylogenetic trees may improve phylogenetic footprinting
  18. 4498
    “…Color change was measured via smartphone camera using an application programmed in Java. The microchip was compared to a standard 96-well sandwich ELISA. …”
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    Detection of Plasmodium Aldolase Using a Smartphone and Microfluidic Enzyme Linked Immunosorbent Assay
  19. 4499
    “…We have developed Specvis, a free and open-source application written in Java programming language that can run on any personal computer to meet this requirement (http://www.specvis.pl/). …”
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    Specvis: Free and open-source software for visual field examination
  20. 4500
    “…These structures were developed to make it easy to process data across different languages, and send data to a JavaScript-based web client.…”
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    Open chemistry: RESTful web APIs, JSON, NWChem and the modern web application
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