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  1. 5241
    “…We developed a server and filter module called BCI2000Web providing an HTTP connection capable of escalation into an RFC6455 WebSocket, which enables direct communication between a browser and a BCI2000 distribution in real-time, facilitating a number of novel applications. We also present a JavaScript module, bci2k.js, that allows web developers to create paradigms and visualizations using this interface in an easy-to-use and intuitive manner. …”
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    BCI2000Web and WebFM: Browser-Based Tools for Brain Computer Interfaces and Functional Brain Mapping
  2. 5242
    “…Participants originated from primary and secondary care facilities in the Java and Sulawesi regions. Ordinal regression analysis was conducted with the quintiles of the EQ-5D index scores as the dependent variable to investigate the multivariate association with the participants’ socio-demographic characteristics and clinical condition. …”
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    Health-related quality of life in Indonesian type 2 diabetes mellitus outpatients measured with the Bahasa version of EQ-5D
  3. 5243
    “…We developed data-acquisition workflows for Apache Storm and NiFi in Java and Python to capture patient monitoring and laboratory data for downstream analytics. …”
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    Health Care and Precision Medicine Research: Analysis of a Scalable Data Science Platform
  4. 5244
    “…This 2-scale (global and country-level) cancer map adopts a database-driven model, which was implemented using the Google Map Application Programming Interface (API) and asynchronous JavaScript and XML (AJAX) technology. Seven visualization techniques were used to present data. …”
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    Online community collaborative map: A geospatial and data visualization tool for cancer data
  5. 5245
    por Will, Thorsten, Helms, Volkhard
    Publicado 2019
    “…A platform-independent Java binary, a user guide with example data and the source code are freely available at https://sourceforge.net/projects/complexchange/. …”
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    Differential analysis of combinatorial protein complexes with CompleXChange
  6. 5246
    “…The study was a cross sectional study conducted in 3 sub-districts in the city of Magelang, Central Java, Indonesia. Eggs of Ae. aegypti collected from 195 sample households were reared and were tested for resistance to pyrethroids by using PCR. …”
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    Insecticide resistance in Aedes aegypti: An impact from human urbanization?
  7. 5247
    “…METHODS: We examined possible differences in loss to follow-up (LTFU) and survival between HIV-infected females and males over a 7-year period in an HIV clinic in Bandung, West Java. Data imputation was performed on missing covariates and a multi-state Cox regression was used to investigate the effects of sex and other covariates on patient transitions among four states: (1) clinic enrollment with HIV, (2) initiation/continuation/re-initiation of antiretroviral therapy (ART), (3) LTFU, and (4) death. …”
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    Are there differences in HIV retention in care between female and male patients in Indonesia? A multi-state analysis of a retrospective cohort study
  8. 5248
    por Hennig, André, Nieselt, Kay
    Publicado 2019
    “…GPA is implemented in Java, uses progressiveMauve and offers a parallel computation of WGAs. …”
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    Efficient merging of genome profile alignments
  9. 5249
    “…METHODS: A cross-sectional study of 334 children in three villages of Banten Province, located in the western part of Java Island, was conducted in May 2018. Female caregivers who were responsible for providing medications to children were interviewed. …”
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    Use of antibiotics for common illnesses among children aged under 5 years in a rural community in Indonesia: a cross-sectional study
  10. 5250
    “…Piper cubeba L. is the berry of a shrub that is indigenous to Java, Southern Borneo, Sumatra, and other islands in the Indian Ocean. …”
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    Antibacterial and Antispore Activities of Isolated Compounds from Piper cubeba L.
  11. 5251
    “…This result can supply a scientific reference for the accurate assessment of the SOC storage in the karst areas of southwestern China, the islands of Java, northern and central Vietnam, Indonesia, Kampot Province in Cambodia and in the general area of what used to be Yugoslavia, along with other karst areas with similar ecological backgrounds.…”
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    Discrepancies in Karst Soil Organic Carbon in Southwest China for Different Land Use Patterns: A Case Study of Guizhou Province
  12. 5252
    “…GenGraph utilises existing file formats and methods in the generation of these graphs, allowing graphs to be visualised and imported with widely used applications, including Cytoscape, R, and Java Script. CONCLUSIONS: GenGraph provides a set of tools for generating graph based representations of sets of sequences with a simple conceptual model, written in the widely used coding language Python, and publicly available on Github. …”
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    GenGraph: a python module for the simple generation and manipulation of genome graphs
  13. 5253
    “…RESULTS: We developed a user-friendly and versatile program based on standard web techniques, such as Hyper Text Markup Language 5 (HTML5), Cascade Style Sheet (CSS) and JavaScript. Both non-periodic organic molecule and crystal structure can be visualized, built and edited interactively. …”
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    3DStructGen: an interactive web-based 3D structure generation for non-periodic molecule and crystal
  14. 5254
    “…NG-Tax 2.0 is written in Java. The code, the ontology, a Galaxy platform implementation, the analysis toolbox, tutorials and example SPARQL queries are freely available at http://wurssb.gitlab.io/ngtax under the MIT License.…”
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    NG-Tax 2.0: A Semantic Framework for High-Throughput Amplicon Analysis
  15. 5255
    “…SmartPhase is implemented as an open-source Java tool and freely available at http://ibis.helmholtz-muenchen.de/smartphase/.…”
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    SmartPhase: Accurate and fast phasing of heterozygous variant pairs for genetic diagnosis of rare diseases
  16. 5256
    “…In this study, we analyzed the quantitative trait loci (QTLs) involved in resistance to Peronosclerospora sorghi (sorghum DM), P. maydis (Java DM), and Sclerophthora macrospora (crazy top DM) using a recombinant inbred line (RIL) from a cross between B73 (susceptible) and Ki11 (resistant), and the candidate genes for P. sorghi, P. maydis, and S. macrospora resistance were discovered. …”
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    Identification and Validation of Candidate Genes Conferring Resistance to Downy Mildew in Maize (Zea mays L.)
  17. 5257
    “…In this study, all the process, including extracting sequences from GenBank flat file and calculating codon usage values, was conducted by Java codes, and these bioinformatics-related methods may be useful in predicting the evolutionary patterns of pandemic viruses.…”
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    Genomic Analysis of Influenza A Viruses, including Avian Flu (H5N1) Strains
  18. 5258
    “…It is also established in French Polynesia, the Samoan Islands, and likely other south Pacific islands, with additional records of occurrence from Java, New Zealand, and now Canada.…”
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    Xylocopa sonorina Smith, 1874 from Vancouver, British Columbia, Canada (Hymenoptera: Apidae, Xylocopinae) with comments on its taxonomy
  19. 5259
    “…Decon2 is available as an R package and Java application (https://github.com/molgenis/systemsgenetics/tree/master/Decon2) and as a web tool (www.molgenis.org/deconvolution).…”
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    Deconvolution of bulk blood eQTL effects into immune cell subpopulations
  20. 5260
    “…The first tool, called the NWB Query Engine, is written in Java. It allows searching the complete content of NWB files. …”
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    NWB Query Engines: Tools to Search Data Stored in Neurodata Without Borders Format
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