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  1. 5361
    “…HCV Genie 2 is built with client-side JavaScript; allowing the program to run in the user' browser rather than on an unknown server, essentially eliminating data and patient privacy concerns. …”
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    Hepatitis C Virus Genie: A Web 2.0 Interpretation and Analytics Platform for the Versant Hepatitis C Virus Genotype Line Probe Assay Version 2.0
  2. 5362
    “…For five different benchmarks, on average a speedup of 34.54 times has been achieved by Rubus as compared to Java on a basic GPU having only 96 cores. Whereas, for a matrix multiplication benchmark the average execution speedup of 84 times has been achieved by Rubus on the same GPU. …”
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    Rubus: A compiler for seamless and extensible parallelism
  3. 5363
    por Kluge, Michael, Friedel, Caroline C.
    Publicado 2018
    “…Watchdog is implemented in Java and thus platform-independent and allows easy sharing of workflows and corresponding program modules. …”
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    Watchdog – a workflow management system for the distributed analysis of large-scale experimental data
  4. 5364
    “…RESULTS: To better quantify NETs and NET-like structures, we created DNA Area and NETosis Analysis (DANA), a novel ImageJ/Java based program which provides a simple, semi-automated approach to quantify NET-like structures and DNA area. …”
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    DNA Area and NETosis Analysis (DANA): a High-Throughput Method to Quantify Neutrophil Extracellular Traps in Fluorescent Microscope Images
  5. 5365
    “…QTM is a command line tool written in the Java programming language. This tool takes scientific articles from the Europe PMC repository as input, extracts QTL tables using keyword matching and ontology-based concept identification. …”
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    QTLTableMiner(++): semantic mining of QTL tables in scientific articles
  6. 5366
    “…Immunochemical dyeing, light microscope, and Image Processing and Analy- sis in Java were used for evaluations. Statistical significant p was p<0.05. …”
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    Evaluation of apoptosis indexes in currently used oral alpha- blockers in prostate: a pilot study
  7. 5367
    “…CONCLUSIONS: SimCAL is developed in java and is available as a standalone tool, with intuitive, user-friendly graphical interface and also as a console application. …”
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    SimCAL: a flexible tool to compute biochemical reaction similarity
  8. 5368
    “…It was developed using Java and integrates existing technology as FreeLing, the Plant Ontology (PO), the Plant Glossary, the Ontology Term Organizer (OTO) and the Flora Mesoamericana English-Spanish Glossary.…”
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    Semi-automatic Extraction of Plants Morphological Characters from Taxonomic Descriptions Written in Spanish
  9. 5369
    por Krivák, Radoslav, Hoksza, David
    Publicado 2018
    “…It is available as a user-friendly stand-alone command line program and a Java library. P2Rank has a lightweight installation and does not depend on other bioinformatics tools or large structural or sequence databases. …”
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    P2Rank: machine learning based tool for rapid and accurate prediction of ligand binding sites from protein structure
  10. 5370
    “…METHODS: A survey was administered to medicine, nursing, midwifery, and dentistry faculty members at 17 institutions in Central Java Province, Indonesia. Respondents were asked to rate their attitudes toward IPC and IPE using a previously validated “Attitude toward Interprofessional Health care Collaboration and Education” scale. …”
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    Understanding attitude of health care professional teachers toward interprofessional health care collaboration and education in a Southeast Asian country
  11. 5371
    “…METHODS: RNA-Seq data and corresponding clinical information of CRC cohort were downloaded from the TCGA data portal. Then, a java application, known as SpliceSeq, was used to evaluate the RNA splicing patterns and calculate the Percent Spliced In (PSI) value. …”
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    Profiles of alternative splicing in colorectal cancer and their clinical significance: A study based on large-scale sequencing data
  12. 5372
    “…The strains isolated from patients on Java Island had the highest resistance rates to garenoxacin and rifaximin. …”
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    Alternative eradication regimens for Helicobacter pylori infection in Indonesian regions with high metronidazole and levofloxacin resistance
  13. 5373
    por Otlu, Burçak, Can, Tolga
    Publicado 2019
    “…CONCLUSIONS: We implemented JOA in Java using the fork/join framework which speeds up parallel processing by taking advantage of all available processor cores. …”
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    JOA: Joint Overlap Analysis of multiple genomic interval sets
  14. 5374
    “…The web application was developed using Java and deployed on the Tomcat server. The user interface was developed using HTML5, JQuery v.3.1.0, and the Cytoscape Graph API v.1.0.4. …”
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    IPCT: Integrated Pharmacogenomic Platform of Human Cancer Cell Lines and Tissues
  15. 5375
    por Chan, Kin Onn, Grismer, L. Lee
    Publicado 2019
    “…Myanmar), and Leptophryne borbonica (Peninsular Malaysia, Java, Borneo, and Sumatra) are consistent with interspecific divergences of other Southeast Asian bufonid taxa. …”
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    To split or not to split? Multilocus phylogeny and molecular species delimitation of southeast Asian toads (family: Bufonidae)
  16. 5376
    “…We investigated the factors which influenced the process of QI based on experience of maternal health QI teams in three Puskesmas in Cianjur district, West Java province, Indonesia. METHODS: Qualitative data were collected using 28 in-depth interviews at two points of time: pre- (April 2016) and post- QI intervention (April 2017), involving national, provincial, district and Puskesmas managers; and Puskesmas QI team members. …”
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    What factors do make quality improvement work in primary health care? Experiences of maternal health quality improvement teams in three Puskesmas in Indonesia
  17. 5377
    “…To facilitate the reliability assessment of predicted PPIs, the source species of interolog templates, GO annotations, subcellular localizations and gene expression similarities are also provided. JavaScript packages were employed to visualize structures of protein complexes, protein interaction sites and protein interaction networks. …”
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    PlaPPISite: a comprehensive resource for plant protein-protein interaction sites
  18. 5378
    “…Suspected TB cases were from the areas of East Java Province from January 2016 to December 2018. …”
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    Difficulties with the implemented xpert MTB/RIF for determining diagnosis of pulmonary and extrapulmonary tuberculosis in adults and children
  19. 5379
    “…Two other eurytopic species, A. longirostra and I. puella, possess highly divergent populations in peripheral Sunda Islands (Java and/or Palawan) and India. These species probably possess intermediate dispersal abilities that allowed them to colonize new areas, and then remained largely isolated subsequently. …”
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    Opening the door to greater phylogeographic inference in Southeast Asia: Comparative genomic study of five codistributed rainforest bird species using target capture and historical DNA
  20. 5380
    “…In addition, three novel species are also described as C. javanense, C. makassarense and C. tainanense, associated with anthracnose of chili fruit in West Java (Indonesia); Makassar, South Sulawesi (Indonesia); and Tainan (Taiwan), respectively. …”
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    Identification, prevalence and pathogenicity of Colletotrichum species causing anthracnose of Capsicum annuum in Asia
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