CMDB: the comprehensive population genome variation database of China

por Li, Zhichao, Jiang, Xiaosen, Fang, Mingyan, Bai, Yong, Liu, Siyang, Huang, Shujia, Jin, Xin
Publicado 2022

The MHC Motif Atlas: a database of MHC binding specificities and ligands

por Tadros, Daniel M, Eggenschwiler, Simon, Racle, Julien, Gfeller, David
Publicado 2022

IAnimal: a cross-species omics knowledgebase for animals

por Fu, Yuhua, Liu, Hong, Dou, Jingwen, Wang, Yue, Liao, Yong, Huang, Xin, Tang, Zhenshuang, Xu, JingYa, Yin, Dong, Zhu, Shilin, Liu, Yangfan, Shen, Xiong, Liu, Hengyi, Liu, Jiaqi, Yang, Xin, Zhang, Yi, Xiang, Yue, Li, Jingjin, Zheng, Zhuqing, Zhao, Yunxia, Ma, Yunlong, Wang, Haiyan, Du, Xiaoyong, Xie, Shengsong, Xu, Xuewen, Zhang, Haohao, Yin, Lilin, Zhu, Mengjin, Yu, Mei, Li, Xinyun, Liu, Xiaolei, Zhao, Shuhong
Publicado 2022

CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database

por Alcock, Brian P, Huynh, William, Chalil, Romeo, Smith, Keaton W, Raphenya, Amogelang R, Wlodarski, Mateusz A, Edalatmand, Arman, Petkau, Aaron, Syed, Sohaib A, Tsang, Kara K, Baker, Sheridan J C, Dave, Mugdha, McCarthy, Madeline C, Mukiri, Karyn M, Nasir, Jalees A, Golbon, Bahar, Imtiaz, Hamna, Jiang, Xingjian, Kaur, Komal, Kwong, Megan, Liang, Zi Cheng, Niu, Keyu C, Shan, Prabakar, Yang, Jasmine Y J, Gray, Kristen L, Hoad, Gemma R, Jia, Baofeng, Bhando, Timsy, Carfrae, Lindsey A, Farha, Maya A, French, Shawn, Gordzevich, Rodion, Rachwalski, Kenneth, Tu, Megan M, Bordeleau, Emily, Dooley, Damion, Griffiths, Emma, Zubyk, Haley L, Brown, Eric D, Maguire, Finlay, Beiko, Robert G, Hsiao, William W L, Brinkman, Fiona S L, Van Domselaar, Gary, McArthur, Andrew G
Publicado 2022

The new uORFdb: integrating literature, sequence, and variation data in a central hub for uORF research

por Manske, Felix, Ogoniak, Lynn, Jürgens, Lara, Grundmann, Norbert, Makałowski, Wojciech, Wethmar, Klaus
Publicado 2022

eggNOG 6.0: enabling comparative genomics across 12 535 organisms

por Hernández-Plaza, Ana, Szklarczyk, Damian, Botas, Jorge, Cantalapiedra, Carlos P, Giner-Lamia, Joaquín, Mende, Daniel R, Kirsch, Rebecca, Rattei, Thomas, Letunic, Ivica, Jensen, Lars J, Bork, Peer, von Mering, Christian, Huerta-Cepas, Jaime
Publicado 2022

ChromLoops: a comprehensive database for specific protein-mediated chromatin loops in diverse organisms

por Zhou, Qiangwei, Cheng, Sheng, Zheng, Shanshan, Wang, Zhenji, Guan, Pengpeng, Zhu, Zhixian, Huang, Xingyu, Zhou, Cong, Li, Guoliang
Publicado 2022

Pharos 2023: an integrated resource for the understudied human proteome

por Kelleher, Keith J, Sheils, Timothy K, Mathias, Stephen L, Yang, Jeremy J, Metzger, Vincent T, Siramshetty, Vishal B, Nguyen, Dac-Trung, Jensen, Lars Juhl, Vidović, Dušica, Schürer, Stephan C, Holmes, Jayme, Sharma, Karlie R, Pillai, Ajay, Bologa, Cristian G, Edwards, Jeremy S, Mathé, Ewy A, Oprea, Tudor I
Publicado 2022

The European Nucleotide Archive in 2022

por Burgin, Josephine, Ahamed, Alisha, Cummins, Carla, Devraj, Rajkumar, Gueye, Khadim, Gupta, Dipayan, Gupta, Vikas, Haseeb, Muhammad, Ihsan, Maira, Ivanov, Eugene, Jayathilaka, Suran, Balavenkataraman Kadhirvelu, Vishnukumar, Kumar, Manish, Lathi, Ankur, Leinonen, Rasko, Mansurova, Milena, McKinnon, Jasmine, O’Cathail, Colman, Paupério, Joana, Pesant, Stéphane, Rahman, Nadim, Rinck, Gabriele, Selvakumar, Sandeep, Suman, Swati, Vijayaraja, Senthilnathan, Waheed, Zahra, Woollard, Peter, Yuan, David, Zyoud, Ahmad, Burdett, Tony, Cochrane, Guy
Publicado 2022

OrthoDB v11: annotation of orthologs in the widest sampling of organismal diversity

por Kuznetsov, Dmitry, Tegenfeldt, Fredrik, Manni, Mosè, Seppey, Mathieu, Berkeley, Matthew, Kriventseva, Evgenia V, Zdobnov, Evgeny M
Publicado 2022

SEdb 2.0: a comprehensive super-enhancer database of human and mouse

por Wang, Yuezhu, Song, Chao, Zhao, Jun, Zhang, Yuexin, Zhao, Xilong, Feng, Chenchen, Zhang, Guorui, Zhu, Jiang, Wang, Fan, Qian, Fengcui, Zhou, Liwei, Zhang, Jian, Bai, Xuefeng, Ai, Bo, Liu, Xinyu, Wang, Qiuyu, Li, Chunquan
Publicado 2022

G4Atlas: a comprehensive transcriptome-wide G-quadruplex database

por Yu, Haopeng, Qi, Yiman, Yang, Bibo, Yang, Xiaofei, Ding, Yiliang
Publicado 2022

PhaSepDB in 2022: annotating phase separation-related proteins with droplet states, co-phase separation partners and other experimental information

por Hou, Chao, Wang, Xinxin, Xie, Haotai, Chen, Taoyu, Zhu, Peiyu, Xu, Xiaofeng, You, Kaiqiang, Li, Tingting
Publicado 2022

Fungal names: a comprehensive nomenclatural repository and knowledge base for fungal taxonomy

por Wang, Fang, Wang, Ke, Cai, Lei, Zhao, Mingjun, Kirk, Paul M, Fan, Guomei, Sun, Qinglan, Li, Bo, Wang, Shuai, Yu, Zhengfei, Han, Dong, Ma, Juncai, Wu, Linhuan, Yao, Yijian
Publicado 2022

gutMDisorder v2.0: a comprehensive database for dysbiosis of gut microbiota in phenotypes and interventions

por Qi, Changlu, Cai, Yiting, Qian, Kai, Li, Xuefeng, Ren, Jialiang, Wang, Ping, Fu, Tongze, Zhao, Tianyi, Cheng, Liang, Shi, Lei, Zhang, Xue
Publicado 2022

Comparative Toxicogenomics Database (CTD): update 2023

por Davis, Allan Peter, Wiegers, Thomas C, Johnson, Robin J, Sciaky, Daniela, Wiegers, Jolene, Mattingly, Carolyn J
Publicado 2022

MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters

por Terlouw, Barbara R, Blin, Kai, Navarro-Muñoz, Jorge C, Avalon, Nicole E, Chevrette, Marc G, Egbert, Susan, Lee, Sanghoon, Meijer, David, Recchia, Michael J J, Reitz, Zachary L, van Santen, Jeffrey A, Selem-Mojica, Nelly, Tørring, Thomas, Zaroubi, Liana, Alanjary, Mohammad, Aleti, Gajender, Aguilar, César, Al-Salihi, Suhad A A, Augustijn, Hannah E, Avelar-Rivas, J Abraham, Avitia-Domínguez, Luis A, Barona-Gómez, Francisco, Bernaldo-Agüero, Jordan, Bielinski, Vincent A, Biermann, Friederike, Booth, Thomas J, Carrion Bravo, Victor J, Castelo-Branco, Raquel, Chagas, Fernanda O, Cruz-Morales, Pablo, Du, Chao, Duncan, Katherine R, Gavriilidou, Athina, Gayrard, Damien, Gutiérrez-García, Karina, Haslinger, Kristina, Helfrich, Eric J N, van der Hooft, Justin J J, Jati, Afif P, Kalkreuter, Edward, Kalyvas, Nikolaos, Kang, Kyo Bin, Kautsar, Satria, Kim, Wonyong, Kunjapur, Aditya M, Li, Yong-Xin, Lin, Geng-Min, Loureiro, Catarina, Louwen, Joris J R, Louwen, Nico L L, Lund, George, Parra, Jonathan, Philmus, Benjamin, Pourmohsenin, Bita, Pronk, Lotte J U, Rego, Adriana, Rex, Devasahayam Arokia Balaya, Robinson, Serina, Rosas-Becerra, L Rodrigo, Roxborough, Eve T, Schorn, Michelle A, Scobie, Darren J, Singh, Kumar Saurabh, Sokolova, Nika, Tang, Xiaoyu, Udwary, Daniel, Vigneshwari, Aruna, Vind, Kristiina, Vromans, Sophie P J M, Waschulin, Valentin, Williams, Sam E, Winter, Jaclyn M, Witte, Thomas E, Xie, Huali, Yang, Dong, Yu, Jingwei, Zdouc, Mitja, Zhong, Zheng, Collemare, Jérôme, Linington, Roger G, Weber, Tilmann, Medema, Marnix H
Publicado 2022

Startle responses in Duchenne muscular dystrophy: a novel biomarker of brain dystrophin deficiency

por Maresh, Kate, Papageorgiou, Andriani, Ridout, Deborah, Harrison, Neil A, Mandy, William, Skuse, David, Muntoni, Francesco
Publicado 2022

CRdb: a comprehensive resource for deciphering chromatin regulators in human

por Zhang, Yimeng, Zhang, Yuexin, Song, Chao, Zhao, Xilong, Ai, Bo, Wang, Yuezhu, Zhou, Liwei, Zhu, Jiang, Feng, Chenchen, Xu, Liyan, Wang, Qiuyu, Sun, Hong, Fang, Qiaoli, Xu, Xiaozheng, Li, Enmin, Li, Chunquan
Publicado 2022

EpiFactors 2022: expansion and enhancement of a curated database of human epigenetic factors and complexes

por Marakulina, Daria, Vorontsov, Ilya E, Kulakovskiy, Ivan V, Lennartsson, Andreas, Drabløs, Finn, Medvedeva, Yulia A
Publicado 2022