Discovery and characterization of novel type I-D CRISPR-guided transposons identified among diverse Tn7-like elements in cyanobacteria

por Hsieh, Shan-Chi, Peters, Joseph E
Publicado 2022

Freddie: annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing

por Orabi, Baraa, Xie, Ning, McConeghy, Brian, Dong, Xuesen, Chauve, Cedric, Hach, Faraz
Publicado 2022

Molecular architecture and oligomerization of Candida glabrata Cdc13 underpin its telomeric DNA-binding and unfolding activity

por Coloma, Javier, Gonzalez-Rodriguez, Nayim, Balaguer, Francisco A, Gmurczyk, Karolina, Aicart-Ramos, Clara, Nuero, Óscar M, Luque-Ortega, Juan Román, Calugaru, Kimberly, Lue, Neal F, Moreno-Herrero, Fernando, Llorca, Oscar
Publicado 2023

ONE-seq: epitranscriptome and gene-specific profiling of NAD-capped RNA

por Niu, Kongyan, Zhang, Jinyang, Ge, Shuwen, Li, Dean, Sun, Kunfeng, You, Yingnan, Qiu, Jiaqian, Wang, Kun, Wang, Xueting, Liu, Rui, Liu, Yandong, Li, Bing, Zhu, Zheng-Jiang, Qu, Lefeng, Jiang, Hong, Liu, Nan
Publicado 2022

Influence of chain length and branching on poly(ADP-ribose)–protein interactions

por Löffler, Tobias, Krüger, Annika, Zirak, Peyman, Winterhalder, Martin J, Müller, Anna-Lena, Fischbach, Arthur, Mangerich, Aswin, Zumbusch, Andreas
Publicado 2023

A fish herpesvirus highlights functional diversities among Zα domains related to phase separation induction and A-to-Z conversion

por Diallo, Mamadou Amadou, Pirotte, Sébastien, Hu, Yunlong, Morvan, Léa, Rakus, Krzysztof, Suárez, Nicolás M, PoTsang, Lee, Saneyoshi, Hisao, Xu, Yan, Davison, Andrew J, Tompa, Peter, Sussman, Joel L, Vanderplasschen, Alain
Publicado 2022

Construction of a cross-species cell landscape at single-cell level

por Wang, Renying, Zhang, Peijing, Wang, Jingjing, Ma, Lifeng, E, Weigao, Suo, Shengbao, Jiang, Mengmeng, Li, Jiaqi, Chen, Haide, Sun, Huiyu, Fei, Lijiang, Zhou, Ziming, Zhou, Yincong, Chen, Yao, Zhang, Weiqi, Wang, Xinru, Mei, Yuqing, Sun, Zhongyi, Yu, Chengxuan, Shao, Jikai, Fu, Yuting, Xiao, Yanyu, Ye, Fang, Fang, Xing, Wu, Hanyu, Guo, Qile, Fang, Xiunan, Li, Xia, Gao, Xianzhi, Wang, Dan, Xu, Peng-Fei, Zeng, Rui, Xu, Gang, Zhu, Lijun, Wang, Lie, Qu, Jing, Zhang, Dan, Ouyang, Hongwei, Huang, He, Chen, Ming, NG, Shyh-Chang, Liu, Guang-Hui, Yuan, Guo-Cheng, Guo, Guoji, Han, Xiaoping
Publicado 2022

LazySampling and LinearSampling: fast stochastic sampling of RNA secondary structure with applications to SARS-CoV-2

por Zhang, He, Li, Sizhen, Zhang, Liang, Mathews, David H, Huang, Liang
Publicado 2022

Incorporating cell hierarchy to decipher the functional diversity of single cells

por Chen, Lingxi, Li, Shuai Cheng
Publicado 2022

POT-3 preferentially binds the terminal DNA-repeat on the telomeric G-overhang

por Yu, Xupeng, Gray, Sean, Ferreira, Helder C
Publicado 2022

Identification and characterization of RNA binding sites for (p)ppGpp using RNA-DRaCALA

por Jagodnik, Jonathan, Tjaden, Brian, Ross, Wilma, Gourse, Richard L
Publicado 2023

The DEAD-box protein Dbp6 is an ATPase and RNA annealase interacting with the peptidyl transferase center (PTC) of the ribosome

por Khreiss, Ali, Capeyrou, Régine, Lebaron, Simon, Albert, Benjamin, Bohnsack, Katherine E, Bohnsack, Markus T, Henry, Yves, Henras, Anthony K, Humbert, Odile
Publicado 2023

Cis-mediated interactions of the SARS-CoV-2 frameshift RNA alter its conformations and affect function

por Pekarek, Lukas, Zimmer, Matthias M, Gribling-Burrer, Anne-Sophie, Buck, Stefan, Smyth, Redmond, Caliskan, Neva
Publicado 2022

Ratchet, swivel, tilt and roll: a complete description of subunit rotation in the ribosome

por Hassan, Asem, Byju, Sandra, Freitas, Frederico Campos, Roc, Claude, Pender, Nisaa, Nguyen, Kien, Kimbrough, Evelyn M, Mattingly, Jacob M, Gonzalez Jr., Ruben L, de Oliveira, Ronaldo Junio, Dunham, Christine M, Whitford, Paul C
Publicado 2022

Translation initiation of leaderless and polycistronic transcripts in mammalian mitochondria

por Remes, Cristina, Khawaja, Anas, Pearce, Sarah F, Dinan, Adam M, Gopalakrishna, Shreekara, Cipullo, Miriam, Kyriakidis, Vasileios, Zhang, Jingdian, Dopico, Xaquin Castro, Yukhnovets, Olessya, Atanassov, Ilian, Firth, Andrew E, Cooperman, Barry, Rorbach, Joanna
Publicado 2023

Exploiting natural riboswitches for aptamer engineering and validation

por Mohsen, Michael G, Midy, Matthew K, Balaji, Aparaajita, Breaker, Ronald R
Publicado 2023

Resolution of sequence divergence for repeat-mediated deletions shows a polarity that is mediated by MLH1

por Trost, Hannah, Merkell, Arianna, Lopezcolorado, Felicia Wednesday, Stark, Jeremy M
Publicado 2023

CK2 promotes jasmonic acid signaling response by phosphorylating MYC2 in Arabidopsis

por Zhu, Jiang, Wang, Wen-Shu, Yan, Da-Wei, Hong, Li-Wei, Li, Ting-Ting, Gao, Xiang, Yang, Yun-Huang, Ren, Feng, Lu, Ying-Tang, Yuan, Ting-Ting
Publicado 2022

Npl3 functions in mRNP assembly by recruitment of mRNP components to the transcription site and their transfer onto the mRNA

por Keil, Philipp, Wulf, Alexander, Kachariya, Nitin, Reuscher, Samira, Hühn, Kristin, Silbern, Ivan, Altmüller, Janine, Keller, Mario, Stehle, Ralf, Zarnack, Kathi, Sattler, Michael, Urlaub, Henning, Sträßer, Katja
Publicado 2022

The S. cerevisiae m(6)A-reader Pho92 promotes timely meiotic recombination by controlling key methylated transcripts

por Scutenaire, Jérémy, Plassard, Damien, Matelot, Mélody, Villa, Tommaso, Zumsteg, Julie, Libri, Domenico, Séraphin, Bertrand
Publicado 2022