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  1. 9661
    “…Regarding microbiota, at phylum level, Firmicutes were differentially abundant across treatment (maximum for C and minimum in S, FDR > 0.05). …”
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    Dried fruit pomace inclusion in poultry diet: growth performance, intestinal morphology and physiology
  2. 9662
    “…Differentially abundant taxa were identified by Linear discriminant analysis Effect Size (LEfSe) analysis (P < 0.05, LDA score > 2.0). At phylum level, Actinobacteria was significantly enriched in W36 at all time points while Synergistetes (53 weeks), Spirochaetes (58 weeks), and Synergistetes and Spirochaetes (67 weeks) were significantly higher in HB. …”
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    Effects of Housing Types on Cecal Microbiota of Two Different Strains of Laying Hens During the Late Production Phase
  3. 9663
    “…Dietary treatments increased serum IgA, IgG, and IgM, Chao 1, observed species, and the abundance of the phylum Fimicutes but decreased the proportion of Proteobacteria (p < 0.05). …”
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    Effects of Fermented Soybean Meal Supplementation on the Growth Performance and Cecal Microbiota Community of Broiler Chickens
  4. 9664
    “…The high-energy and high-protein diets increased the relative abundance of phylum Bacteroidetes and genera Prevotella_1 and Succiniclasticum, while decreasing the number of Proteobacteria (p < 0.05). …”
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    Alterations in Rumen Bacterial Community and Metabolome Characteristics of Cashmere Goats in Response to Dietary Nutrient Density
  5. 9665
    “…In addition, significant changes were observed in the gut microbiota, including Proteobacteria and the ratio of Bacteroidetes to Firmicutes at the phylum level, as well as Helicobacter, Clostridium and Lactobacillus at the genus level. …”
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    Antioxidant activity of selenium-enriched Chrysomyia megacephala (Fabricius) larvae powder and its impact on intestinal microflora in D-galactose induced aging mice
  6. 9666
    “…High-throughput sequencing of total 16S rRNA genes revealed the Bacteroidetes as the only keystone taxa at phylum level, and 106 and 120 genera were keystone phylotypes. …”
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    Keystone Microbiomes Revealed by 14 Years of Field Restoration of the Degraded Agricultural Soil Under Distinct Vegetation Scenarios
  7. 9667
    “…Blue mould has also been reported on stone fruits (cherry, plum, peach), small fruits (grape, strawberry, kiwi), and hazel nut. …”
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    Penicillium expansum: biology, omics, and management tools for a global postharvest pathogen causing blue mould of pome fruit
  8. 9668
    “…Hydra belongs to the phylum Cnidaria where the first asymmetry in the body plan was observed and the oral-aboral axis originated. …”
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    Epigenomic landscape of enhancer elements during Hydra head organizer formation
  9. 9669
    “…Here, we found that the only identifiable mitochondrial fission adaptor protein that is evolutionarily conserved in the Apicomplexan phylum, Fis1, it not essential in P. falciparum asexual stages. …”
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    Dispensable Role of Mitochondrial Fission Protein 1 (Fis1) in the Erythrocytic Development of Plasmodium falciparum
  10. 9670
    “…Cryptosporidium, a protozoan parasite in the phylum Apicomplexa, is the etiological agent of cryptosporidiosis, an intestinal infection characterized by profuse watery diarrhea. …”
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    Cryptosporidium Infections in Africa—How Important Is Zoonotic Transmission? A Review of the Evidence
  11. 9671
    “…A significant decrease of the relative abundance of Firmicutes phylum and lower Firmicutes:Bacteroidetes ratios (False Discovery Rate [FDR] < 0.05) were also identified in TM15 broiler chickens when compared to the C group. …”
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    Yellow Mealworm Inclusion in Diets for Heavy-Size Broiler Chickens: Implications for Intestinal Microbiota and Mucin Dynamics
  12. 9672
    “…However, during the wet season, water addition altered the compositions of bacterial rather than fungal community based on principal component analysis. At the phylum level, the relative abundance of Actinobacteria increased with water addition and had a significantly positive correlation with K(+) (r(2) = 0.70, p < 0.001) and Na(+) (r(2) = 0.36, p < 0.01) contents, whereas that of Acidobacteria, Planctomycetes, and Verrucomicrobia decreased and showed negative correlation with soil K and Na content, and no changes were observed for the fungal phyla. …”
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    Bacterial Communities Are More Sensitive to Water Addition Than Fungal Communities Due to Higher Soil K and Na in a Degraded Karst Ecosystem of Southwestern China
  13. 9673
    “…The effect of administration period and dosage of VAs on Phyla Firmicutes Proteobacteria, Synergistetes and Phylum Bacteroides was investigated. These biomarkers’ abundance can be employed to predict the sample’s treatment group.…”
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    Degradation of Veterinary Antibiotics in Swine Manure via Anaerobic Digestion
  14. 9674
    “…The autotrophic HP/HB cycle functions in Crenarchaeota of the order Sulfolobales and in ammonia-oxidizing Archaea of the phylum Thaumarchaeota that are highly abundant in marine, terrestrial, and geothermal environments. …”
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    Convergent Evolution of a Promiscuous 3-Hydroxypropionyl-CoA Dehydratase/Crotonyl-CoA Hydratase in Crenarchaeota and Thaumarchaeota
  15. 9675
    “…However, the bacterial diversity and the proportion of dominant bacteria at the phylum and genus levels were similar between the PFT I and PFT II groups. …”
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    Association of exacerbation phenotype with the sputum microbiome in chronic obstructive pulmonary disease patients during the clinically stable state
  16. 9676
    “…Bacteroidetes were dominant for all treatments, while phylum Firmicutes significantly increased during the HC period. …”
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    Diet Transition from High-Forage to High-Concentrate Alters Rumen Bacterial Community Composition, Epithelial Transcriptomes and Ruminal Fermentation Parameters in Dairy Cows
  17. 9677
    “…Analysis of CRISPR spacers indicates that phages of all three putative families infect bacteria of the phylum Bacteroidetes. Comparative genomic analysis of the three candidate phage families revealed features without precedent in phage genomes. …”
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    Thousands of previously unknown phages discovered in whole-community human gut metagenomes
  18. 9678
    “…Excessive longan induced a significant reduction of microbial diversity in colitic mice, accompanied with aggravated alterations of DSS-associated bacteria including the increase of Proteobacteria phylum and genera of Bacteroides, Akkermansia, Turicibacter and Escherchia-Shigella, and the decrease of norank_f__Muribaculaceae. …”
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    Excessive Intake of Longan Arillus Alters gut Homeostasis and Aggravates Colitis in Mice
  19. 9679
    “…Differences in microbiome community composition mostly within the Firmicutes phylum were observed between hGOS and GOS, compared to control-fed animals. …”
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    Safety and Modulatory Effects of Humanized Galacto-Oligosaccharides on the Gut Microbiome
  20. 9680
    “…Taxonomic analysis revealed no effect of adding the ROD extract on the relative abundance of bacteria at the phylum level with either the basal diet or DDGS diet, while at the genus level, the microbial community was affected by the addition of both DDGS and the ROD extract. …”
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    Effect of Dried Distillers Grains With Solubles and Red Osier Dogwood Extract on Fermentation Pattern and Microbial Profiles of a High-Grain Diet in an Artificial Rumen System
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