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Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq

INTRODUCTION: Triptolide (TPL) is a promising plant-derived compound for clinical therapy of multiple human diseases; however, its application was limited considering its toxicity. METHODS: To explore the underlying molecular mechanism of TPL nephrotoxicity, a network pharmacology based approach was...

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Autores principales: Luo, Yue-Ming, Yang, Shu-Dong, Wen, Miao-Yu, Wang, Bing, Liu, Jia-Hui, Li, Si-Ting, Li, Yu-Yan, Cheng, Hong, Zhao, Li-Li, Li, Shun-Min, Jiang, Jian-Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10027700/
https://www.ncbi.nlm.nih.gov/pubmed/36959927
http://dx.doi.org/10.3389/fpls.2023.1144583
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author Luo, Yue-Ming
Yang, Shu-Dong
Wen, Miao-Yu
Wang, Bing
Liu, Jia-Hui
Li, Si-Ting
Li, Yu-Yan
Cheng, Hong
Zhao, Li-Li
Li, Shun-Min
Jiang, Jian-Jun
author_facet Luo, Yue-Ming
Yang, Shu-Dong
Wen, Miao-Yu
Wang, Bing
Liu, Jia-Hui
Li, Si-Ting
Li, Yu-Yan
Cheng, Hong
Zhao, Li-Li
Li, Shun-Min
Jiang, Jian-Jun
author_sort Luo, Yue-Ming
collection PubMed
description INTRODUCTION: Triptolide (TPL) is a promising plant-derived compound for clinical therapy of multiple human diseases; however, its application was limited considering its toxicity. METHODS: To explore the underlying molecular mechanism of TPL nephrotoxicity, a network pharmacology based approach was utilized to predict candidate targets related with TPL toxicity, followed by deep RNA-seq analysis to characterize the features of three transcriptional elements include protein coding genes (PCGs), long noncoding RNAs (lncRNAs) and circular RNAs (circRNAs) as well as their associations with nephrotoxicity in rats with TPL treatment. RESULTS & DISCUSSION: Although the deeper mechanisms of TPL nephrotoxcity remain further exploration, our results suggested that c-Jun is a potential target of TPL and Per1 related circadian rhythm signaling is involved in TPL induced renal toxicity.
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spelling pubmed-100277002023-03-22 Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq Luo, Yue-Ming Yang, Shu-Dong Wen, Miao-Yu Wang, Bing Liu, Jia-Hui Li, Si-Ting Li, Yu-Yan Cheng, Hong Zhao, Li-Li Li, Shun-Min Jiang, Jian-Jun Front Plant Sci Plant Science INTRODUCTION: Triptolide (TPL) is a promising plant-derived compound for clinical therapy of multiple human diseases; however, its application was limited considering its toxicity. METHODS: To explore the underlying molecular mechanism of TPL nephrotoxicity, a network pharmacology based approach was utilized to predict candidate targets related with TPL toxicity, followed by deep RNA-seq analysis to characterize the features of three transcriptional elements include protein coding genes (PCGs), long noncoding RNAs (lncRNAs) and circular RNAs (circRNAs) as well as their associations with nephrotoxicity in rats with TPL treatment. RESULTS & DISCUSSION: Although the deeper mechanisms of TPL nephrotoxcity remain further exploration, our results suggested that c-Jun is a potential target of TPL and Per1 related circadian rhythm signaling is involved in TPL induced renal toxicity. Frontiers Media S.A. 2023-03-07 /pmc/articles/PMC10027700/ /pubmed/36959927 http://dx.doi.org/10.3389/fpls.2023.1144583 Text en Copyright © 2023 Luo, Yang, Wen, Wang, Liu, Li, Li, Cheng, Zhao, Li and Jiang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Luo, Yue-Ming
Yang, Shu-Dong
Wen, Miao-Yu
Wang, Bing
Liu, Jia-Hui
Li, Si-Ting
Li, Yu-Yan
Cheng, Hong
Zhao, Li-Li
Li, Shun-Min
Jiang, Jian-Jun
Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq
title Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq
title_full Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq
title_fullStr Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq
title_full_unstemmed Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq
title_short Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq
title_sort insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and rna-seq
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10027700/
https://www.ncbi.nlm.nih.gov/pubmed/36959927
http://dx.doi.org/10.3389/fpls.2023.1144583
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