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Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq
INTRODUCTION: Triptolide (TPL) is a promising plant-derived compound for clinical therapy of multiple human diseases; however, its application was limited considering its toxicity. METHODS: To explore the underlying molecular mechanism of TPL nephrotoxicity, a network pharmacology based approach was...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10027700/ https://www.ncbi.nlm.nih.gov/pubmed/36959927 http://dx.doi.org/10.3389/fpls.2023.1144583 |
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author | Luo, Yue-Ming Yang, Shu-Dong Wen, Miao-Yu Wang, Bing Liu, Jia-Hui Li, Si-Ting Li, Yu-Yan Cheng, Hong Zhao, Li-Li Li, Shun-Min Jiang, Jian-Jun |
author_facet | Luo, Yue-Ming Yang, Shu-Dong Wen, Miao-Yu Wang, Bing Liu, Jia-Hui Li, Si-Ting Li, Yu-Yan Cheng, Hong Zhao, Li-Li Li, Shun-Min Jiang, Jian-Jun |
author_sort | Luo, Yue-Ming |
collection | PubMed |
description | INTRODUCTION: Triptolide (TPL) is a promising plant-derived compound for clinical therapy of multiple human diseases; however, its application was limited considering its toxicity. METHODS: To explore the underlying molecular mechanism of TPL nephrotoxicity, a network pharmacology based approach was utilized to predict candidate targets related with TPL toxicity, followed by deep RNA-seq analysis to characterize the features of three transcriptional elements include protein coding genes (PCGs), long noncoding RNAs (lncRNAs) and circular RNAs (circRNAs) as well as their associations with nephrotoxicity in rats with TPL treatment. RESULTS & DISCUSSION: Although the deeper mechanisms of TPL nephrotoxcity remain further exploration, our results suggested that c-Jun is a potential target of TPL and Per1 related circadian rhythm signaling is involved in TPL induced renal toxicity. |
format | Online Article Text |
id | pubmed-10027700 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100277002023-03-22 Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq Luo, Yue-Ming Yang, Shu-Dong Wen, Miao-Yu Wang, Bing Liu, Jia-Hui Li, Si-Ting Li, Yu-Yan Cheng, Hong Zhao, Li-Li Li, Shun-Min Jiang, Jian-Jun Front Plant Sci Plant Science INTRODUCTION: Triptolide (TPL) is a promising plant-derived compound for clinical therapy of multiple human diseases; however, its application was limited considering its toxicity. METHODS: To explore the underlying molecular mechanism of TPL nephrotoxicity, a network pharmacology based approach was utilized to predict candidate targets related with TPL toxicity, followed by deep RNA-seq analysis to characterize the features of three transcriptional elements include protein coding genes (PCGs), long noncoding RNAs (lncRNAs) and circular RNAs (circRNAs) as well as their associations with nephrotoxicity in rats with TPL treatment. RESULTS & DISCUSSION: Although the deeper mechanisms of TPL nephrotoxcity remain further exploration, our results suggested that c-Jun is a potential target of TPL and Per1 related circadian rhythm signaling is involved in TPL induced renal toxicity. Frontiers Media S.A. 2023-03-07 /pmc/articles/PMC10027700/ /pubmed/36959927 http://dx.doi.org/10.3389/fpls.2023.1144583 Text en Copyright © 2023 Luo, Yang, Wen, Wang, Liu, Li, Li, Cheng, Zhao, Li and Jiang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Luo, Yue-Ming Yang, Shu-Dong Wen, Miao-Yu Wang, Bing Liu, Jia-Hui Li, Si-Ting Li, Yu-Yan Cheng, Hong Zhao, Li-Li Li, Shun-Min Jiang, Jian-Jun Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq |
title | Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq |
title_full | Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq |
title_fullStr | Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq |
title_full_unstemmed | Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq |
title_short | Insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and RNA-seq |
title_sort | insights into the mechanisms of triptolide nephrotoxicity through network pharmacology-based analysis and rna-seq |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10027700/ https://www.ncbi.nlm.nih.gov/pubmed/36959927 http://dx.doi.org/10.3389/fpls.2023.1144583 |
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