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Enlightening the Path to Protein Engineering: Chemoselective Turn-On Probes for High-Throughput Screening of Enzymatic Activity

[Image: see text] Many successful stories in enzyme engineering are based on the creation of randomized diversity in large mutant libraries, containing millions to billions of enzyme variants. Methods that enabled their evaluation with high throughput are dominated by spectroscopic techniques due to...

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Autores principales: Hecko, Sebastian, Schiefer, Astrid, Badenhorst, Christoffel P. S., Fink, Michael J., Mihovilovic, Marko D., Bornscheuer, Uwe T., Rudroff, Florian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10037340/
https://www.ncbi.nlm.nih.gov/pubmed/36853077
http://dx.doi.org/10.1021/acs.chemrev.2c00304
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author Hecko, Sebastian
Schiefer, Astrid
Badenhorst, Christoffel P. S.
Fink, Michael J.
Mihovilovic, Marko D.
Bornscheuer, Uwe T.
Rudroff, Florian
author_facet Hecko, Sebastian
Schiefer, Astrid
Badenhorst, Christoffel P. S.
Fink, Michael J.
Mihovilovic, Marko D.
Bornscheuer, Uwe T.
Rudroff, Florian
author_sort Hecko, Sebastian
collection PubMed
description [Image: see text] Many successful stories in enzyme engineering are based on the creation of randomized diversity in large mutant libraries, containing millions to billions of enzyme variants. Methods that enabled their evaluation with high throughput are dominated by spectroscopic techniques due to their high speed and sensitivity. A large proportion of studies relies on fluorogenic substrates that mimic the chemical properties of the target or coupled enzymatic assays with an optical read-out that assesses the desired catalytic efficiency indirectly. The most reliable hits, however, are achieved by screening for conversions of the starting material to the desired product. For this purpose, functional group assays offer a general approach to achieve a fast, optical read-out. They use the chemoselectivity, differences in electronic and steric properties of various functional groups, to reduce the number of false-positive results and the analytical noise stemming from enzymatic background activities. This review summarizes the developments and use of functional group probes for chemoselective derivatizations, with a clear focus on screening for enzymatic activity in protein engineering.
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spelling pubmed-100373402023-03-25 Enlightening the Path to Protein Engineering: Chemoselective Turn-On Probes for High-Throughput Screening of Enzymatic Activity Hecko, Sebastian Schiefer, Astrid Badenhorst, Christoffel P. S. Fink, Michael J. Mihovilovic, Marko D. Bornscheuer, Uwe T. Rudroff, Florian Chem Rev [Image: see text] Many successful stories in enzyme engineering are based on the creation of randomized diversity in large mutant libraries, containing millions to billions of enzyme variants. Methods that enabled their evaluation with high throughput are dominated by spectroscopic techniques due to their high speed and sensitivity. A large proportion of studies relies on fluorogenic substrates that mimic the chemical properties of the target or coupled enzymatic assays with an optical read-out that assesses the desired catalytic efficiency indirectly. The most reliable hits, however, are achieved by screening for conversions of the starting material to the desired product. For this purpose, functional group assays offer a general approach to achieve a fast, optical read-out. They use the chemoselectivity, differences in electronic and steric properties of various functional groups, to reduce the number of false-positive results and the analytical noise stemming from enzymatic background activities. This review summarizes the developments and use of functional group probes for chemoselective derivatizations, with a clear focus on screening for enzymatic activity in protein engineering. American Chemical Society 2023-02-28 /pmc/articles/PMC10037340/ /pubmed/36853077 http://dx.doi.org/10.1021/acs.chemrev.2c00304 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Hecko, Sebastian
Schiefer, Astrid
Badenhorst, Christoffel P. S.
Fink, Michael J.
Mihovilovic, Marko D.
Bornscheuer, Uwe T.
Rudroff, Florian
Enlightening the Path to Protein Engineering: Chemoselective Turn-On Probes for High-Throughput Screening of Enzymatic Activity
title Enlightening the Path to Protein Engineering: Chemoselective Turn-On Probes for High-Throughput Screening of Enzymatic Activity
title_full Enlightening the Path to Protein Engineering: Chemoselective Turn-On Probes for High-Throughput Screening of Enzymatic Activity
title_fullStr Enlightening the Path to Protein Engineering: Chemoselective Turn-On Probes for High-Throughput Screening of Enzymatic Activity
title_full_unstemmed Enlightening the Path to Protein Engineering: Chemoselective Turn-On Probes for High-Throughput Screening of Enzymatic Activity
title_short Enlightening the Path to Protein Engineering: Chemoselective Turn-On Probes for High-Throughput Screening of Enzymatic Activity
title_sort enlightening the path to protein engineering: chemoselective turn-on probes for high-throughput screening of enzymatic activity
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10037340/
https://www.ncbi.nlm.nih.gov/pubmed/36853077
http://dx.doi.org/10.1021/acs.chemrev.2c00304
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