Cargando…
EasyCellType: marker-based cell-type annotation by automatically querying multiple databases
MOTIVATION: Cell label annotation is a challenging step in the analysis of single-cell RNA sequencing (scRNA-seq) data, especially for tissue types that are less commonly studied. The accumulation of scRNA-seq studies and biological knowledge leads to several well-maintained cell marker databases. M...
Autores principales: | Li, Ruoxing, Zhang, Jianjun, Li, Ziyi |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10049754/ https://www.ncbi.nlm.nih.gov/pubmed/36998720 http://dx.doi.org/10.1093/bioadv/vbad029 |
Ejemplares similares
-
Automatic Cell Type Annotation Using Marker Genes for Single-Cell RNA Sequencing Data
por: Chen, Yu, et al.
Publicado: (2022) -
OntoQuery: easy-to-use web-based OWL querying
por: Tudose, Ilinca, et al.
Publicado: (2013) -
CrossQuery: A Web Tool for Easy Associative Querying of Transcriptome Data
por: Wagner, Toni U., et al.
Publicado: (2011) -
BioMart – biological queries made easy
por: Smedley, Damian, et al.
Publicado: (2009) -
The automatic annotation of bacterial genomes
por: Richardson, Emily J., et al.
Publicado: (2013)