SPLASH2 provides ultra-efficient, scalable, and unsupervised discovery on raw sequencing reads

SPLASH is an unsupervised, reference-free, and unifying algorithm that discovers regulated sequence variation through statistical analysis of k-mer composition, subsuming many application-specific algorithms. Here, we introduce SPLASH2, a fast, scalable implementation of SPLASH based on an efficient...

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Detalles Bibliográficos
Autores principales: Kokot, Marek, Dehghannasiri, Roozbeh, Baharav, Tavor, Salzman, Julia, Deorowicz, Sebastian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10055302/
https://www.ncbi.nlm.nih.gov/pubmed/36993432
http://dx.doi.org/10.1101/2023.03.17.533189

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10055302/
https://www.ncbi.nlm.nih.gov/pubmed/36993432
http://dx.doi.org/10.1101/2023.03.17.533189

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