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SPLASH2 provides ultra-efficient, scalable, and unsupervised discovery on raw sequencing reads
SPLASH is an unsupervised, reference-free, and unifying algorithm that discovers regulated sequence variation through statistical analysis of k-mer composition, subsuming many application-specific algorithms. Here, we introduce SPLASH2, a fast, scalable implementation of SPLASH based on an efficient...
Autores principales: | Kokot, Marek, Dehghannasiri, Roozbeh, Baharav, Tavor, Salzman, Julia, Deorowicz, Sebastian |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10055302/ https://www.ncbi.nlm.nih.gov/pubmed/36993432 http://dx.doi.org/10.1101/2023.03.17.533189 |
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