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TrEMOLO: accurate transposable element allele frequency estimation using long-read sequencing data combining assembly and mapping-based approaches
Transposable Element MOnitoring with LOng-reads (TrEMOLO) is a new software that combines assembly- and mapping-based approaches to robustly detect genetic elements called transposable elements (TEs). Using high- or low-quality genome assemblies, TrEMOLO can detect most TE insertions and deletions a...
Autores principales: | Mohamed, Mourdas, Sabot, François, Varoqui, Marion, Mugat, Bruno, Audouin, Katell, Pélisson, Alain, Fiston-Lavier, Anna-Sophie, Chambeyron, Séverine |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10069131/ https://www.ncbi.nlm.nih.gov/pubmed/37013657 http://dx.doi.org/10.1186/s13059-023-02911-2 |
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