transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation

BACKGROUND: RNA-seq followed by de novo transcriptome assembly has been a transformative technique in biological research of non-model organisms, but the computational processing of RNA-seq data entails many different software tools. The complexity of these de novo transcriptomics workflows therefor...

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Detalles Bibliográficos
Autores principales: Fallon, Timothy R., Čalounová, Tereza, Mokrejš, Martin, Weng, Jing-Ke, Pluskal, Tomáš
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10074830/
https://www.ncbi.nlm.nih.gov/pubmed/37016291
http://dx.doi.org/10.1186/s12859-023-05254-8

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10074830/
https://www.ncbi.nlm.nih.gov/pubmed/37016291
http://dx.doi.org/10.1186/s12859-023-05254-8

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