Genomics to Notebook (g2nb): extending the electronic notebook to address the challenges of bioinformatics analysis

We present Genomics to Notebook (g2nb), an environment that combines the JupyterLab notebook system with widely-used bioinformatics platforms. Galaxy, GenePattern, and the JavaScript versions of IGV and Cytoscape are currently available within g2nb. The analyses and visualizations within those platf...

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Detalles Bibliográficos
Autores principales: Reich, Michael, Tabor, Thorin, Liefeld, John, Joshi, Jayadev, Kim, Forrest, Thorvaldsdottir, Helga, Blankenberg, Daniel, Mesirov, Jill P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10104038/
https://www.ncbi.nlm.nih.gov/pubmed/37066251
http://dx.doi.org/10.1101/2023.04.04.535621

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10104038/
https://www.ncbi.nlm.nih.gov/pubmed/37066251
http://dx.doi.org/10.1101/2023.04.04.535621

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