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A Widely Distributed Biosynthetic Cassette Is Responsible for Diverse Plant Side Chain Cross‐Linked Cyclopeptides

Cyclopeptide alkaloids are an abundant class of plant cyclopeptides with over 200 analogs described and bioactivities ranging from analgesic to antiviral. While these natural products have been known for decades, their biosynthetic basis remains unclear. Using a transcriptome‐mining approach, we lin...

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Autores principales: Lima, Stella T., Ampolini, Brigitte G., Underwood, Ethan B., Graf, Tyler N., Earp, Cody E., Khedi, Imani C., Pasquale, Michael A., Chekan, Jonathan R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10107690/
https://www.ncbi.nlm.nih.gov/pubmed/36529706
http://dx.doi.org/10.1002/anie.202218082
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author Lima, Stella T.
Ampolini, Brigitte G.
Underwood, Ethan B.
Graf, Tyler N.
Earp, Cody E.
Khedi, Imani C.
Pasquale, Michael A.
Chekan, Jonathan R.
author_facet Lima, Stella T.
Ampolini, Brigitte G.
Underwood, Ethan B.
Graf, Tyler N.
Earp, Cody E.
Khedi, Imani C.
Pasquale, Michael A.
Chekan, Jonathan R.
author_sort Lima, Stella T.
collection PubMed
description Cyclopeptide alkaloids are an abundant class of plant cyclopeptides with over 200 analogs described and bioactivities ranging from analgesic to antiviral. While these natural products have been known for decades, their biosynthetic basis remains unclear. Using a transcriptome‐mining approach, we link the cyclopeptide alkaloids from Ceanothus americanus to dedicated RiPP precursor peptides and identify new, widely distributed split BURP peptide cyclase containing gene clusters. Guided by our bioinformatic analysis, we identify and isolate new cyclopeptides from Coffea arabica, which we named arabipeptins. Reconstitution of the enzyme activity for the BURP found in the biosynthesis of arabipeptin A validates the activity of the newly discovered split BURP peptide cyclases. These results expand our understanding of the biosynthetic pathways responsible for diverse cyclic plant peptides and suggest that these side chain cross‐link modifications are widely distributed in eudicots.
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spelling pubmed-101076902023-04-18 A Widely Distributed Biosynthetic Cassette Is Responsible for Diverse Plant Side Chain Cross‐Linked Cyclopeptides Lima, Stella T. Ampolini, Brigitte G. Underwood, Ethan B. Graf, Tyler N. Earp, Cody E. Khedi, Imani C. Pasquale, Michael A. Chekan, Jonathan R. Angew Chem Int Ed Engl Communications Cyclopeptide alkaloids are an abundant class of plant cyclopeptides with over 200 analogs described and bioactivities ranging from analgesic to antiviral. While these natural products have been known for decades, their biosynthetic basis remains unclear. Using a transcriptome‐mining approach, we link the cyclopeptide alkaloids from Ceanothus americanus to dedicated RiPP precursor peptides and identify new, widely distributed split BURP peptide cyclase containing gene clusters. Guided by our bioinformatic analysis, we identify and isolate new cyclopeptides from Coffea arabica, which we named arabipeptins. Reconstitution of the enzyme activity for the BURP found in the biosynthesis of arabipeptin A validates the activity of the newly discovered split BURP peptide cyclases. These results expand our understanding of the biosynthetic pathways responsible for diverse cyclic plant peptides and suggest that these side chain cross‐link modifications are widely distributed in eudicots. John Wiley and Sons Inc. 2023-01-12 2023-02-06 /pmc/articles/PMC10107690/ /pubmed/36529706 http://dx.doi.org/10.1002/anie.202218082 Text en © 2022 The Authors. Angewandte Chemie International Edition published by Wiley-VCH GmbH https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Communications
Lima, Stella T.
Ampolini, Brigitte G.
Underwood, Ethan B.
Graf, Tyler N.
Earp, Cody E.
Khedi, Imani C.
Pasquale, Michael A.
Chekan, Jonathan R.
A Widely Distributed Biosynthetic Cassette Is Responsible for Diverse Plant Side Chain Cross‐Linked Cyclopeptides
title A Widely Distributed Biosynthetic Cassette Is Responsible for Diverse Plant Side Chain Cross‐Linked Cyclopeptides
title_full A Widely Distributed Biosynthetic Cassette Is Responsible for Diverse Plant Side Chain Cross‐Linked Cyclopeptides
title_fullStr A Widely Distributed Biosynthetic Cassette Is Responsible for Diverse Plant Side Chain Cross‐Linked Cyclopeptides
title_full_unstemmed A Widely Distributed Biosynthetic Cassette Is Responsible for Diverse Plant Side Chain Cross‐Linked Cyclopeptides
title_short A Widely Distributed Biosynthetic Cassette Is Responsible for Diverse Plant Side Chain Cross‐Linked Cyclopeptides
title_sort widely distributed biosynthetic cassette is responsible for diverse plant side chain cross‐linked cyclopeptides
topic Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10107690/
https://www.ncbi.nlm.nih.gov/pubmed/36529706
http://dx.doi.org/10.1002/anie.202218082
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