streammd: fast low-memory duplicate marking using a Bloom filter

SUMMARY: Identification of duplicate templates is a common preprocessing step in bulk sequence analysis; for large libraries, this can be resource intensive. Here, we present streammd: a fast, memory-efficient, single-pass duplicate marker operating on the principle of a Bloom filter. streammd close...

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Detalles Bibliográficos
Autor principal: Leonard, Conrad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10112951/
https://www.ncbi.nlm.nih.gov/pubmed/37027230
http://dx.doi.org/10.1093/bioinformatics/btad181

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10112951/
https://www.ncbi.nlm.nih.gov/pubmed/37027230
http://dx.doi.org/10.1093/bioinformatics/btad181

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