Cargando…

Kernel-based genetic association analysis for microbiome phenotypes identifies host genetic drivers of beta-diversity

BACKGROUND: Understanding human genetic influences on the gut microbiota helps elucidate the mechanisms by which genetics may influence health outcomes. Typical microbiome genome-wide association studies (GWAS) marginally assess the association between individual genetic variants and individual micr...

Descripción completa

Detalles Bibliográficos
Autores principales:	Liu, Hongjiao, Ling, Wodan, Hua, Xing, Moon, Jee-Young, Williams-Nguyen, Jessica S., Zhan, Xiang, Plantinga, Anna M., Zhao, Ni, Zhang, Angela, Knight, Rob, Qi, Qibin, Burk, Robert D., Kaplan, Robert C., Wu, Michael C.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2023
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10116795/ https://www.ncbi.nlm.nih.gov/pubmed/37081571 http://dx.doi.org/10.1186/s40168-023-01530-0

Ejemplares similares

Accommodating multiple potential normalizations in microbiome associations studies
por: Song, Hoseung, et al.
Publicado: (2023)

Powerful and robust non-parametric association testing for microbiome data via a zero-inflated quantile approach (ZINQ)
por: Ling, Wodan, et al.
Publicado: (2021)

Batch effects removal for microbiome data via conditional quantile regression
por: Ling, Wodan, et al.
Publicado: (2022)

Association of the gut microbiome with kidney function and damage in the Hispanic Community Health Study/Study of Latinos (HCHS/SOL)
por: Peters, Brandilyn A., et al.
Publicado: (2023)

Genetic influences on the human oral microbiome
por: Demmitt, Brittany A., et al.
Publicado: (2017)

A fast kernel independence test for cluster-correlated data
por: Song, Hoseung, et al.
Publicado: (2022)

Comparison of Fecal Collection Methods for Microbiome and Metabolomics Studies
por: Wang, Zheng, et al.
Publicado: (2018)

Gut microbiome composition in the Hispanic Community Health Study/Study of Latinos is shaped by geographic relocation, environmental factors, and obesity
por: Kaplan, Robert C., et al.
Publicado: (2019)

Linux Kernel Programming Part 2: Char Device Drivers and Kernel Synchronization
por: Billimoria, Kaiwan
Publicado: (2021)

Menopause Is Associated with an Altered Gut Microbiome and Estrobolome, with Implications for Adverse Cardiometabolic Risk in the Hispanic Community Health Study/Study of Latinos
por: Peters, Brandilyn A., et al.
Publicado: (2022)

Microbial co-occurrence complicates associations of gut microbiome with US immigration, dietary intake and obesity
por: Wang, Zheng, et al.
Publicado: (2021)

Author Correction: Gut microbiome composition in the Hispanic Community Health Study/Study of Latinos is shaped by geographic relocation, environmental factors, and obesity
por: Kaplan, Robert C., et al.
Publicado: (2020)

Spotlight on the Gut Microbiome in Menopause: Current Insights
por: Peters, Brandilyn A, et al.
Publicado: (2022)

Geography and Location Are the Primary Drivers of Office Microbiome Composition
por: Chase, John, et al.
Publicado: (2016)

The influence of host genetics on the microbiome
por: Tabrett, Alexandra, et al.
Publicado: (2020)

MiRKAT-MC: A Distance-Based Microbiome Kernel Association Test With Multi-Categorical Outcomes
por: Jiang, Zhiwen, et al.
Publicado: (2022)

The genetic architecture of amylose biosynthesis in maize kernel
por: Li, Changsheng, et al.
Publicado: (2017)

A Distance-Based Kernel Association Test Based on the Generalized Linear Mixed Model for Correlated Microbiome Studies
por: Koh, Hyunwook, et al.
Publicado: (2019)

Genetic and Physiological Analysis of Iron Biofortification in Maize Kernels
por: Lung'aho, Mercy G., et al.
Publicado: (2011)

Kernel Architecture of the Genetic Circuitry of the Arabidopsis Circadian System
por: Foo, Mathias, et al.
Publicado: (2016)

Genetic architecture of kernel composition in global sorghum germplasm
por: Rhodes, Davina H., et al.
Publicado: (2017)

Learning the kernel for rare variant genetic association test
por: Falk, Isak, et al.
Publicado: (2023)

Editorial: Drivers of host-microbiome interactions in the rhizosphere
por: Topalović, Olivera, et al.
Publicado: (2023)

Complex host genetics influence the microbiome in inflammatory bowel disease
por: Knights, Dan, et al.
Publicado: (2014)

Distinguishing Genetic Drift from Selection in Papillomavirus Evolution
por: Burk, Robert D., et al.
Publicado: (2023)

Host population genetics and biogeography structure the microbiome of the sponge Cliona delitrix
por: Easson, Cole G., et al.
Publicado: (2020)

Correlations of Host Genetics and Gut Microbiome Composition
por: Dąbrowska, Krystyna, et al.
Publicado: (2016)

Host genetic control of gut microbiome composition
por: Bubier, Jason A., et al.
Publicado: (2021)

Genetic Analysis of Kernel Traits in Maize-Teosinte Introgression Populations
por: Liu, Zhengbin, et al.
Publicado: (2016)

Genetic Analysis of Teosinte Alleles for Kernel Composition Traits in Maize
por: Karn, Avinash, et al.
Publicado: (2017)

Toward the Genetic Basis and Multiple QTLs of Kernel Hardness in Wheat
por: Tu, Min, et al.
Publicado: (2020)

Drivers of within-host genetic diversity in acute infections of viruses
por: Gelbart, Maoz, et al.
Publicado: (2020)

MicrobiomeGWAS: A Tool for Identifying Host Genetic Variants Associated with Microbiome Composition
por: Hua, Xing, et al.
Publicado: (2022)

Temporal, Environmental, and Biological Drivers of the Mucosal Microbiome in a Wild Marine Fish, Scomber japonicus
por: Minich, Jeremiah J., et al.
Publicado: (2020)

Free And Open Source Software At CERN: Integration Of Drivers In The Linux Kernel
por: González Cobas, J D, et al.
Publicado: (2011)

Explaining the Genetic Causality for Complex Phenotype via Deep Association Kernel Learning
por: Bao, Feng, et al.
Publicado: (2020)

Host genetic variation and its microbiome interactions within the Human Microbiome Project
por: Kolde, Raivo, et al.
Publicado: (2018)

Interactions between host genetics and gut microbiome in diabetes and metabolic syndrome
por: Ussar, Siegfried, et al.
Publicado: (2016)

Evaluating the Genetic Background Effect on Dissecting the Genetic Basis of Kernel Traits in Reciprocal Maize Introgression Lines
por: Liu, Ruixiang, et al.
Publicado: (2023)

Host Genetics and Gut Microbiome: Perspectives for Multiple Sclerosis
por: Maglione, Alessandro, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_94ubqkqmnc74sfrhkuf9m8jbd8