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From defaults to databases: parameter and database choice dramatically impact the performance of metagenomic taxonomic classification tools

In metagenomic analyses of microbiomes, one of the first steps is usually the taxonomic classification of reads by comparison to a database of previously taxonomically classified genomes. While different studies comparing metagenomic taxonomic classification methods have determined that different to...

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Detalles Bibliográficos
Autores principales: Wright, Robyn J., Comeau, Andrè M., Langille, Morgan G. I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10132073/
https://www.ncbi.nlm.nih.gov/pubmed/36867161
http://dx.doi.org/10.1099/mgen.0.000949