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AmberMDrun: A Scripting Tool for Running Amber MD in an Easy Way

MD simulations have been widely applied and become a powerful tool in the field of biomacromolecule simulations and computer-aided drug design, etc., which can estimate binding free energy between receptor and ligand. However, the inputs and force field preparation for performing Amber MD is somewha...

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Detalles Bibliográficos
Autores principales: Zhang, Zhi-Wei, Lu, Wen-Cai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10135445/
https://www.ncbi.nlm.nih.gov/pubmed/37189382
http://dx.doi.org/10.3390/biom13040635