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One Scaffold, Two Conformations: The Ring-Flip of the Messenger InsP(8) Occurs under Cytosolic Conditions
Inositol poly- and pyrophosphates (InsPs and PP-InsPs) are central eukaryotic messengers. These very highly phosphorylated molecules can exist in two distinct conformations, a canonical one with five phosphoryl groups in equatorial positions, and a “flipped” conformation with five axial substituents...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10135964/ https://www.ncbi.nlm.nih.gov/pubmed/37189392 http://dx.doi.org/10.3390/biom13040645 |
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author | Kurz, Leonie Schmieder, Peter Veiga, Nicolás Fiedler, Dorothea |
author_facet | Kurz, Leonie Schmieder, Peter Veiga, Nicolás Fiedler, Dorothea |
author_sort | Kurz, Leonie |
collection | PubMed |
description | Inositol poly- and pyrophosphates (InsPs and PP-InsPs) are central eukaryotic messengers. These very highly phosphorylated molecules can exist in two distinct conformations, a canonical one with five phosphoryl groups in equatorial positions, and a “flipped” conformation with five axial substituents. Using (13)C-labeled InsPs/PP-InsPs, the behavior of these molecules was investigated by 2D-NMR under solution conditions reminiscent of a cytosolic environment. Remarkably, the most highly phosphorylated messenger 1,5(PP)(2)-InsP(4) (also termed InsP(8)) readily adopts both conformations at physiological conditions. Environmental factors—such as pH, metal cation composition, and temperature—strongly influence the conformational equilibrium. Thermodynamic data revealed that the transition of InsP(8) from the equatorial to the axial conformation is, in fact, an exothermic process. The speciation of InsPs and PP-InsPs also affects their interaction with protein binding partners; addition of Mg(2+) decreased the binding constant K(d) of InsP(8) to an SPX protein domain. The results illustrate that PP-InsP speciation reacts very sensitively to solution conditions, suggesting it might act as an environment-responsive molecular switch. |
format | Online Article Text |
id | pubmed-10135964 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-101359642023-04-28 One Scaffold, Two Conformations: The Ring-Flip of the Messenger InsP(8) Occurs under Cytosolic Conditions Kurz, Leonie Schmieder, Peter Veiga, Nicolás Fiedler, Dorothea Biomolecules Article Inositol poly- and pyrophosphates (InsPs and PP-InsPs) are central eukaryotic messengers. These very highly phosphorylated molecules can exist in two distinct conformations, a canonical one with five phosphoryl groups in equatorial positions, and a “flipped” conformation with five axial substituents. Using (13)C-labeled InsPs/PP-InsPs, the behavior of these molecules was investigated by 2D-NMR under solution conditions reminiscent of a cytosolic environment. Remarkably, the most highly phosphorylated messenger 1,5(PP)(2)-InsP(4) (also termed InsP(8)) readily adopts both conformations at physiological conditions. Environmental factors—such as pH, metal cation composition, and temperature—strongly influence the conformational equilibrium. Thermodynamic data revealed that the transition of InsP(8) from the equatorial to the axial conformation is, in fact, an exothermic process. The speciation of InsPs and PP-InsPs also affects their interaction with protein binding partners; addition of Mg(2+) decreased the binding constant K(d) of InsP(8) to an SPX protein domain. The results illustrate that PP-InsP speciation reacts very sensitively to solution conditions, suggesting it might act as an environment-responsive molecular switch. MDPI 2023-04-04 /pmc/articles/PMC10135964/ /pubmed/37189392 http://dx.doi.org/10.3390/biom13040645 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Kurz, Leonie Schmieder, Peter Veiga, Nicolás Fiedler, Dorothea One Scaffold, Two Conformations: The Ring-Flip of the Messenger InsP(8) Occurs under Cytosolic Conditions |
title | One Scaffold, Two Conformations: The Ring-Flip of the Messenger InsP(8) Occurs under Cytosolic Conditions |
title_full | One Scaffold, Two Conformations: The Ring-Flip of the Messenger InsP(8) Occurs under Cytosolic Conditions |
title_fullStr | One Scaffold, Two Conformations: The Ring-Flip of the Messenger InsP(8) Occurs under Cytosolic Conditions |
title_full_unstemmed | One Scaffold, Two Conformations: The Ring-Flip of the Messenger InsP(8) Occurs under Cytosolic Conditions |
title_short | One Scaffold, Two Conformations: The Ring-Flip of the Messenger InsP(8) Occurs under Cytosolic Conditions |
title_sort | one scaffold, two conformations: the ring-flip of the messenger insp(8) occurs under cytosolic conditions |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10135964/ https://www.ncbi.nlm.nih.gov/pubmed/37189392 http://dx.doi.org/10.3390/biom13040645 |
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