Cargando…

DNA Polymerase Delta Exhibits Altered Catalytic Properties on Lysine Acetylation

DNA polymerase delta is the primary polymerase that is involved in undamaged nuclear lagging strand DNA replication. Our mass-spectroscopic analysis has revealed that the human DNA polymerase δ is acetylated on subunits p125, p68, and p12. Using substrates that simulate Okazaki fragment intermediate...

Descripción completa

Detalles Bibliográficos
Autores principales: Njeri, Catherine, Pepenella, Sharon, Battapadi, Tripthi, Bambara, Robert A., Balakrishnan, Lata
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137900/
https://www.ncbi.nlm.nih.gov/pubmed/37107532
http://dx.doi.org/10.3390/genes14040774
_version_ 1785032577886715904
author Njeri, Catherine
Pepenella, Sharon
Battapadi, Tripthi
Bambara, Robert A.
Balakrishnan, Lata
author_facet Njeri, Catherine
Pepenella, Sharon
Battapadi, Tripthi
Bambara, Robert A.
Balakrishnan, Lata
author_sort Njeri, Catherine
collection PubMed
description DNA polymerase delta is the primary polymerase that is involved in undamaged nuclear lagging strand DNA replication. Our mass-spectroscopic analysis has revealed that the human DNA polymerase δ is acetylated on subunits p125, p68, and p12. Using substrates that simulate Okazaki fragment intermediates, we studied alterations in the catalytic properties of acetylated polymerase and compared it to the unmodified form. The current data show that the acetylated form of human pol δ displays a higher polymerization activity compared to the unmodified form of the enzyme. Additionally, acetylation enhances the ability of the polymerase to resolve complex structures such as G-quadruplexes and other secondary structures that might be present on the template strand. More importantly, the ability of pol δ to displace a downstream DNA fragment is enhanced upon acetylation. Our current results suggest that acetylation has a profound effect on the activity of pol δ and supports the hypothesis that acetylation may promote higher-fidelity DNA replication.
format Online
Article
Text
id pubmed-10137900
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-101379002023-04-28 DNA Polymerase Delta Exhibits Altered Catalytic Properties on Lysine Acetylation Njeri, Catherine Pepenella, Sharon Battapadi, Tripthi Bambara, Robert A. Balakrishnan, Lata Genes (Basel) Article DNA polymerase delta is the primary polymerase that is involved in undamaged nuclear lagging strand DNA replication. Our mass-spectroscopic analysis has revealed that the human DNA polymerase δ is acetylated on subunits p125, p68, and p12. Using substrates that simulate Okazaki fragment intermediates, we studied alterations in the catalytic properties of acetylated polymerase and compared it to the unmodified form. The current data show that the acetylated form of human pol δ displays a higher polymerization activity compared to the unmodified form of the enzyme. Additionally, acetylation enhances the ability of the polymerase to resolve complex structures such as G-quadruplexes and other secondary structures that might be present on the template strand. More importantly, the ability of pol δ to displace a downstream DNA fragment is enhanced upon acetylation. Our current results suggest that acetylation has a profound effect on the activity of pol δ and supports the hypothesis that acetylation may promote higher-fidelity DNA replication. MDPI 2023-03-23 /pmc/articles/PMC10137900/ /pubmed/37107532 http://dx.doi.org/10.3390/genes14040774 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Njeri, Catherine
Pepenella, Sharon
Battapadi, Tripthi
Bambara, Robert A.
Balakrishnan, Lata
DNA Polymerase Delta Exhibits Altered Catalytic Properties on Lysine Acetylation
title DNA Polymerase Delta Exhibits Altered Catalytic Properties on Lysine Acetylation
title_full DNA Polymerase Delta Exhibits Altered Catalytic Properties on Lysine Acetylation
title_fullStr DNA Polymerase Delta Exhibits Altered Catalytic Properties on Lysine Acetylation
title_full_unstemmed DNA Polymerase Delta Exhibits Altered Catalytic Properties on Lysine Acetylation
title_short DNA Polymerase Delta Exhibits Altered Catalytic Properties on Lysine Acetylation
title_sort dna polymerase delta exhibits altered catalytic properties on lysine acetylation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137900/
https://www.ncbi.nlm.nih.gov/pubmed/37107532
http://dx.doi.org/10.3390/genes14040774
work_keys_str_mv AT njericatherine dnapolymerasedeltaexhibitsalteredcatalyticpropertiesonlysineacetylation
AT pepenellasharon dnapolymerasedeltaexhibitsalteredcatalyticpropertiesonlysineacetylation
AT battapaditripthi dnapolymerasedeltaexhibitsalteredcatalyticpropertiesonlysineacetylation
AT bambararoberta dnapolymerasedeltaexhibitsalteredcatalyticpropertiesonlysineacetylation
AT balakrishnanlata dnapolymerasedeltaexhibitsalteredcatalyticpropertiesonlysineacetylation