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Roles for mycobacterial DinB2 in frameshift and substitution mutagenesis

Translesion synthesis by translesion polymerases is a conserved mechanism of DNA damage tolerance. In bacteria, DinB enzymes are the widely distributed promutagenic translesion polymerases. The role of DinBs in mycobacterial mutagenesis was unclear until recent studies revealed a role for mycobacter...

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Autores principales: Dupuy, Pierre, Ghosh, Shreya, Fay, Allison, Adefisayo, Oyindamola, Gupta, Richa, Shuman, Stewart, Glickman, Michael S
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10159617/
https://www.ncbi.nlm.nih.gov/pubmed/37141254
http://dx.doi.org/10.7554/eLife.83094
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author Dupuy, Pierre
Ghosh, Shreya
Fay, Allison
Adefisayo, Oyindamola
Gupta, Richa
Shuman, Stewart
Glickman, Michael S
author_facet Dupuy, Pierre
Ghosh, Shreya
Fay, Allison
Adefisayo, Oyindamola
Gupta, Richa
Shuman, Stewart
Glickman, Michael S
author_sort Dupuy, Pierre
collection PubMed
description Translesion synthesis by translesion polymerases is a conserved mechanism of DNA damage tolerance. In bacteria, DinB enzymes are the widely distributed promutagenic translesion polymerases. The role of DinBs in mycobacterial mutagenesis was unclear until recent studies revealed a role for mycobacterial DinB1 in substitution and frameshift mutagenesis, overlapping with that of translesion polymerase DnaE2. Mycobacterium smegmatis encodes two additional DinBs (DinB2 and DinB3) and Mycobacterium tuberculosis encodes DinB2, but the roles of these polymerases in mycobacterial damage tolerance and mutagenesis is unknown. The biochemical properties of DinB2, including facile utilization of ribonucleotides and 8-oxo-guanine, suggest that DinB2 could be a promutagenic polymerase. Here, we examine the effects of DinB2 and DinB3 overexpression in mycobacterial cells. We demonstrate that DinB2 can drive diverse substitution mutations conferring antibiotic resistance. DinB2 induces frameshift mutations in homopolymeric sequences, both in vitro and in vivo. DinB2 switches from less to more mutagenic in the presence of manganese in vitro. This study indicates that DinB2 may contribute to mycobacterial mutagenesis and antibiotic resistance acquisition in combination with DinB1 and DnaE2.
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spelling pubmed-101596172023-05-05 Roles for mycobacterial DinB2 in frameshift and substitution mutagenesis Dupuy, Pierre Ghosh, Shreya Fay, Allison Adefisayo, Oyindamola Gupta, Richa Shuman, Stewart Glickman, Michael S eLife Microbiology and Infectious Disease Translesion synthesis by translesion polymerases is a conserved mechanism of DNA damage tolerance. In bacteria, DinB enzymes are the widely distributed promutagenic translesion polymerases. The role of DinBs in mycobacterial mutagenesis was unclear until recent studies revealed a role for mycobacterial DinB1 in substitution and frameshift mutagenesis, overlapping with that of translesion polymerase DnaE2. Mycobacterium smegmatis encodes two additional DinBs (DinB2 and DinB3) and Mycobacterium tuberculosis encodes DinB2, but the roles of these polymerases in mycobacterial damage tolerance and mutagenesis is unknown. The biochemical properties of DinB2, including facile utilization of ribonucleotides and 8-oxo-guanine, suggest that DinB2 could be a promutagenic polymerase. Here, we examine the effects of DinB2 and DinB3 overexpression in mycobacterial cells. We demonstrate that DinB2 can drive diverse substitution mutations conferring antibiotic resistance. DinB2 induces frameshift mutations in homopolymeric sequences, both in vitro and in vivo. DinB2 switches from less to more mutagenic in the presence of manganese in vitro. This study indicates that DinB2 may contribute to mycobacterial mutagenesis and antibiotic resistance acquisition in combination with DinB1 and DnaE2. eLife Sciences Publications, Ltd 2023-05-04 /pmc/articles/PMC10159617/ /pubmed/37141254 http://dx.doi.org/10.7554/eLife.83094 Text en © 2023, Dupuy, Ghosh et al https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Microbiology and Infectious Disease
Dupuy, Pierre
Ghosh, Shreya
Fay, Allison
Adefisayo, Oyindamola
Gupta, Richa
Shuman, Stewart
Glickman, Michael S
Roles for mycobacterial DinB2 in frameshift and substitution mutagenesis
title Roles for mycobacterial DinB2 in frameshift and substitution mutagenesis
title_full Roles for mycobacterial DinB2 in frameshift and substitution mutagenesis
title_fullStr Roles for mycobacterial DinB2 in frameshift and substitution mutagenesis
title_full_unstemmed Roles for mycobacterial DinB2 in frameshift and substitution mutagenesis
title_short Roles for mycobacterial DinB2 in frameshift and substitution mutagenesis
title_sort roles for mycobacterial dinb2 in frameshift and substitution mutagenesis
topic Microbiology and Infectious Disease
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10159617/
https://www.ncbi.nlm.nih.gov/pubmed/37141254
http://dx.doi.org/10.7554/eLife.83094
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