A framework for high-throughput sequence alignment using real processing-in-memory systems

MOTIVATION: Sequence alignment is a memory bound computation whose performance in modern systems is limited by the memory bandwidth bottleneck. Processing-in-memory (PIM) architectures alleviate this bottleneck by providing the memory with computing competencies. We propose Alignment-in-Memory (AIM)...

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Detalles Bibliográficos
Autores principales: Diab, Safaa, Nassereldine, Amir, Alser, Mohammed, Gómez Luna, Juan, Mutlu, Onur, El Hajj, Izzat
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Original Paper
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10159653/
https://www.ncbi.nlm.nih.gov/pubmed/36971586
http://dx.doi.org/10.1093/bioinformatics/btad155

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10159653/
https://www.ncbi.nlm.nih.gov/pubmed/36971586
http://dx.doi.org/10.1093/bioinformatics/btad155

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