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Model-based dimensionality reduction for single-cell RNA-seq using generalized bilinear models

Dimensionality reduction is a critical step in the analysis of single-cell RNA-seq data. The standard approach is to apply a transformation to the count matrix, followed by principal components analysis. However, this approach can spuriously indicate heterogeneity where it does not exist and mask tr...

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Detalles Bibliográficos
Autores principales: Nicol, Phillip B., Miller, Jeffrey W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10168202/
https://www.ncbi.nlm.nih.gov/pubmed/37162914
http://dx.doi.org/10.1101/2023.04.21.537881