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CurSa: scripts to curate metadata and sample genomes from GISAID for analysis and display in nextstrain and microreact

The coronavirus SARS-CoV-2 is the most sequenced pathogen ever, with several million genome copies deposited in the GISAID database. This large amount of genomic information poses non-trivial bioinformatic challenges for those interested in studying the evolution of SARS-CoV-2. One common problem wh...

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Detalles Bibliográficos
Autor principal: Delaye, Luis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10174701/
https://www.ncbi.nlm.nih.gov/pubmed/37180471
http://dx.doi.org/10.1093/biomethods/bpad007