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PascalX: a Python library for GWAS gene and pathway enrichment tests

SUMMARY: ‘PascalX’ is a Python library providing fast and accurate tools for mapping SNP-wise GWAS summary statistics. Specifically, it allows for scoring genes and annotated gene sets for enrichment signals based on data from, both, single GWAS and pairs of GWAS. The gene scores take into account t...

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Detalles Bibliográficos
Autores principales: Krefl, Daniel, Brandulas Cammarata, Alessandro, Bergmann, Sven
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10185402/
https://www.ncbi.nlm.nih.gov/pubmed/37137228
http://dx.doi.org/10.1093/bioinformatics/btad296