VirPipe: an easy-to-use and customizable pipeline for detecting viral genomes from Nanopore sequencing

 : Detection and analysis of viral genomes with Nanopore sequencing has shown great promise in the surveillance of pathogen outbreaks. However, the number of virus detection pipelines supporting Nanopore sequencing is very limited. Here, we present VirPipe, a new pipeline for the detection of viral...

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Detalles Bibliográficos
Autores principales: Kim, Kijin, Park, Kyungmin, Lee, Seonghyeon, Baek, Seung-Hwan, Lim, Tae-Hun, Kim, Jongwoo, Manavalan, Balachandran, Song, Jin-Won, Kim, Won-Keun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10191607/
https://www.ncbi.nlm.nih.gov/pubmed/37129547
http://dx.doi.org/10.1093/bioinformatics/btad293

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10191607/
https://www.ncbi.nlm.nih.gov/pubmed/37129547
http://dx.doi.org/10.1093/bioinformatics/btad293

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