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VirPipe: an easy-to-use and customizable pipeline for detecting viral genomes from Nanopore sequencing
: Detection and analysis of viral genomes with Nanopore sequencing has shown great promise in the surveillance of pathogen outbreaks. However, the number of virus detection pipelines supporting Nanopore sequencing is very limited. Here, we present VirPipe, a new pipeline for the detection of viral...
Autores principales: | Kim, Kijin, Park, Kyungmin, Lee, Seonghyeon, Baek, Seung-Hwan, Lim, Tae-Hun, Kim, Jongwoo, Manavalan, Balachandran, Song, Jin-Won, Kim, Won-Keun |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10191607/ https://www.ncbi.nlm.nih.gov/pubmed/37129547 http://dx.doi.org/10.1093/bioinformatics/btad293 |
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