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Scrooge: a fast and memory-frugal genomic sequence aligner for CPUs, GPUs, and ASICs
MOTIVATION: Pairwise sequence alignment is a very time-consuming step in common bioinformatics pipelines. Speeding up this step requires heuristics, efficient implementations, and/or hardware acceleration. A promising candidate for all of the above is the recently proposed GenASM algorithm. We ident...
| Autores principales: | , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Oxford University Press
2023
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10191611/ https://www.ncbi.nlm.nih.gov/pubmed/36961334 http://dx.doi.org/10.1093/bioinformatics/btad151 |