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Fulgor: A fast and compact k-mer index for large-scale matching and color queries

The problem of sequence identification or matching — determining the subset of references from a given collection that are likely to contain a query nucleotide sequence — is relevant for many important tasks in Computational Biology, such as metagenomics and pan-genome analysis. Due to the complex n...

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Detalles Bibliográficos
Autores principales: Fan, Jason, Singh, Noor Pratap, Khan, Jamshed, Pibiri, Giulio Ermanno, Patro, Rob
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10197524/
https://www.ncbi.nlm.nih.gov/pubmed/37214944
http://dx.doi.org/10.1101/2023.05.09.539895