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Applying CRISPR-Cas9 screens to dissect hematological malignancies

Bit by bit, over the last few decades, functional genomic tools have been piecing together the molecular puzzle driving tumorigenesis in human patients. Nevertheless, our understanding of the role of several genes and regulatory elements that drive critical cancer-associated physiological processes...

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Autores principales: Iyer, Deepak Narayanan, Schimmer, Aaron D., Chang, Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The American Society of Hematology 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10225491/
https://www.ncbi.nlm.nih.gov/pubmed/36355853
http://dx.doi.org/10.1182/bloodadvances.2022008966
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author Iyer, Deepak Narayanan
Schimmer, Aaron D.
Chang, Hong
author_facet Iyer, Deepak Narayanan
Schimmer, Aaron D.
Chang, Hong
author_sort Iyer, Deepak Narayanan
collection PubMed
description Bit by bit, over the last few decades, functional genomic tools have been piecing together the molecular puzzle driving tumorigenesis in human patients. Nevertheless, our understanding of the role of several genes and regulatory elements that drive critical cancer-associated physiological processes from disease development to progression to spread is very limited, which significantly affects our ability of applying these insights in the context of improved disease management. The recent advent of clustered regularly interspaced short palindromic repeats (CRISPR)-CRISPR-associated protein 9 (Cas9)–based technology and its application in cancer genomics has, however, allowed the generation of a wealth of knowledge that has helped decipher several critical questions associated with translational cancer research. Precisely, the high-throughput capability coupled with a high level of technological plasticity associated with the CRISPR-Cas9 screens have expanded our horizons from a mere struggle to appreciate cancer as a genetic disease to observing the integrated genomic/epigenomic network of numerous malignancies and correlating it with our present knowledge of drugging strategies to develop innovative approaches for next-generation precision cancer medicine. Specifically, within blood cancers, current CRISPR screens have specifically focused on improving our understanding of drug resistance mechanisms, disease biology, the development of novel therapeutic approaches, and identifying the molecular mechanisms of current therapies, with an underlying aim of improving disease outcomes. Here, we review the development of the CRISPR-Cas9 genome-editing strategy, explicitly focusing on the recent advances in the CRISPR-Cas9–based screening approaches, its current capabilities, limitations, and future applications in the context of hematological malignancies.
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spelling pubmed-102254912023-05-30 Applying CRISPR-Cas9 screens to dissect hematological malignancies Iyer, Deepak Narayanan Schimmer, Aaron D. Chang, Hong Blood Adv Review Article Bit by bit, over the last few decades, functional genomic tools have been piecing together the molecular puzzle driving tumorigenesis in human patients. Nevertheless, our understanding of the role of several genes and regulatory elements that drive critical cancer-associated physiological processes from disease development to progression to spread is very limited, which significantly affects our ability of applying these insights in the context of improved disease management. The recent advent of clustered regularly interspaced short palindromic repeats (CRISPR)-CRISPR-associated protein 9 (Cas9)–based technology and its application in cancer genomics has, however, allowed the generation of a wealth of knowledge that has helped decipher several critical questions associated with translational cancer research. Precisely, the high-throughput capability coupled with a high level of technological plasticity associated with the CRISPR-Cas9 screens have expanded our horizons from a mere struggle to appreciate cancer as a genetic disease to observing the integrated genomic/epigenomic network of numerous malignancies and correlating it with our present knowledge of drugging strategies to develop innovative approaches for next-generation precision cancer medicine. Specifically, within blood cancers, current CRISPR screens have specifically focused on improving our understanding of drug resistance mechanisms, disease biology, the development of novel therapeutic approaches, and identifying the molecular mechanisms of current therapies, with an underlying aim of improving disease outcomes. Here, we review the development of the CRISPR-Cas9 genome-editing strategy, explicitly focusing on the recent advances in the CRISPR-Cas9–based screening approaches, its current capabilities, limitations, and future applications in the context of hematological malignancies. The American Society of Hematology 2022-11-12 /pmc/articles/PMC10225491/ /pubmed/36355853 http://dx.doi.org/10.1182/bloodadvances.2022008966 Text en © 2023 by The American Society of Hematology. Licensed under Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0), permitting only noncommercial, nonderivative use with attribution. All other rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Review Article
Iyer, Deepak Narayanan
Schimmer, Aaron D.
Chang, Hong
Applying CRISPR-Cas9 screens to dissect hematological malignancies
title Applying CRISPR-Cas9 screens to dissect hematological malignancies
title_full Applying CRISPR-Cas9 screens to dissect hematological malignancies
title_fullStr Applying CRISPR-Cas9 screens to dissect hematological malignancies
title_full_unstemmed Applying CRISPR-Cas9 screens to dissect hematological malignancies
title_short Applying CRISPR-Cas9 screens to dissect hematological malignancies
title_sort applying crispr-cas9 screens to dissect hematological malignancies
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10225491/
https://www.ncbi.nlm.nih.gov/pubmed/36355853
http://dx.doi.org/10.1182/bloodadvances.2022008966
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