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The complete chloroplast genome of Primula vialii (Primulaceae), an ornamental plant
Primula vialii Delavay ex Franch. (1905) is an alpine species with an ornamental value. In this study, we sequenced, assembled, and annotated the chloroplast genome of P. vialii. The results showed that it was a double-stranded, closed circular DNA with 154,897 bp in length, comprising a small singl...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10236967/ https://www.ncbi.nlm.nih.gov/pubmed/37275395 http://dx.doi.org/10.1080/23802359.2023.2202268 |
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author | Liu, Yunqi Zhang, Li Wang, Shubao Li, Rui Huang, Yuan |
author_facet | Liu, Yunqi Zhang, Li Wang, Shubao Li, Rui Huang, Yuan |
author_sort | Liu, Yunqi |
collection | PubMed |
description | Primula vialii Delavay ex Franch. (1905) is an alpine species with an ornamental value. In this study, we sequenced, assembled, and annotated the chloroplast genome of P. vialii. The results showed that it was a double-stranded, closed circular DNA with 154,897 bp in length, comprising a small single-copy (SSC) region of 17,766 bp, a large single-copy (LSC) region of 85,379 bp and a pair of inverted repeat (IR) regions of 25,876 bp. A total of 113 unique genes were annotated, including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The phylogenetic analysis revealed that P. vialii is closely related to Primula flaccida. The cp genomic data will be useful for systematics and evolutionary studies of Primula. |
format | Online Article Text |
id | pubmed-10236967 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-102369672023-06-03 The complete chloroplast genome of Primula vialii (Primulaceae), an ornamental plant Liu, Yunqi Zhang, Li Wang, Shubao Li, Rui Huang, Yuan Mitochondrial DNA B Resour Mitogenome Announcement Primula vialii Delavay ex Franch. (1905) is an alpine species with an ornamental value. In this study, we sequenced, assembled, and annotated the chloroplast genome of P. vialii. The results showed that it was a double-stranded, closed circular DNA with 154,897 bp in length, comprising a small single-copy (SSC) region of 17,766 bp, a large single-copy (LSC) region of 85,379 bp and a pair of inverted repeat (IR) regions of 25,876 bp. A total of 113 unique genes were annotated, including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The phylogenetic analysis revealed that P. vialii is closely related to Primula flaccida. The cp genomic data will be useful for systematics and evolutionary studies of Primula. Taylor & Francis 2023-05-31 /pmc/articles/PMC10236967/ /pubmed/37275395 http://dx.doi.org/10.1080/23802359.2023.2202268 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The terms on which this article has been published allow the posting of the Accepted Manuscript in a repository by the author(s) or with their consent. |
spellingShingle | Mitogenome Announcement Liu, Yunqi Zhang, Li Wang, Shubao Li, Rui Huang, Yuan The complete chloroplast genome of Primula vialii (Primulaceae), an ornamental plant |
title | The complete chloroplast genome of Primula vialii (Primulaceae), an ornamental plant |
title_full | The complete chloroplast genome of Primula vialii (Primulaceae), an ornamental plant |
title_fullStr | The complete chloroplast genome of Primula vialii (Primulaceae), an ornamental plant |
title_full_unstemmed | The complete chloroplast genome of Primula vialii (Primulaceae), an ornamental plant |
title_short | The complete chloroplast genome of Primula vialii (Primulaceae), an ornamental plant |
title_sort | complete chloroplast genome of primula vialii (primulaceae), an ornamental plant |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10236967/ https://www.ncbi.nlm.nih.gov/pubmed/37275395 http://dx.doi.org/10.1080/23802359.2023.2202268 |
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