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MDB-32. TRANSLATION OF NON-CANONICAL OPEN READING FRAMES AS A CANCER CELL SURVIVAL MECHANISM IN CHILDHOOD MEDULLOBLASTOMA

High-risk medulloblastoma is one of the most recalcitrant pediatric cancers, and children with MYC-amplified disease frequently succumb to relapsed disease. Extensive analyses of the coding genome in this disease have characterized additional somatic events in some subsets of patients, though most t...

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Autores principales: Hofman, Damon, Ruiz-Orera, Jorge, Yannuzzi, Ian, Murugesan, Rakesh, van Dinter, Jip, Clauser, Karl, Condurat, Alexandra, Herman, Amy, Shanmugam, Vignesh, Zhou, Kevin, Vogelzang, Jayne, Wang, Li, Roth, Jennifer, Ligon, Keith, Phoenix, Timothy, Root, David, Golub, Todd, Bandopadhayay, Pratiti, van Heesch, Sebastiaan, Prensner, John
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10259982/
http://dx.doi.org/10.1093/neuonc/noad073.264
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author Hofman, Damon
Ruiz-Orera, Jorge
Yannuzzi, Ian
Murugesan, Rakesh
van Dinter, Jip
Clauser, Karl
Condurat, Alexandra
Herman, Amy
Shanmugam, Vignesh
Zhou, Kevin
Vogelzang, Jayne
Wang, Li
Roth, Jennifer
Ligon, Keith
Phoenix, Timothy
Root, David
Golub, Todd
Bandopadhayay, Pratiti
van Heesch, Sebastiaan
Prensner, John
author_facet Hofman, Damon
Ruiz-Orera, Jorge
Yannuzzi, Ian
Murugesan, Rakesh
van Dinter, Jip
Clauser, Karl
Condurat, Alexandra
Herman, Amy
Shanmugam, Vignesh
Zhou, Kevin
Vogelzang, Jayne
Wang, Li
Roth, Jennifer
Ligon, Keith
Phoenix, Timothy
Root, David
Golub, Todd
Bandopadhayay, Pratiti
van Heesch, Sebastiaan
Prensner, John
author_sort Hofman, Damon
collection PubMed
description High-risk medulloblastoma is one of the most recalcitrant pediatric cancers, and children with MYC-amplified disease frequently succumb to relapsed disease. Extensive analyses of the coding genome in this disease have characterized additional somatic events in some subsets of patients, though most tumors lack targetable mutations and do not yield insights regarding their aggressive behavior. At the same time, medulloblastoma is known to exhibit extensive rewiring of translational control in MYC-driven tumors, consistent with recent genetic evidence that the impact of this transcription factor on control of mRNA translation may be the most critical aspect of its function during tumorigenesis. Therefore, to propose previously unknown mechanisms for this disease, we have investigated the functional impact of translation of non-canonical open reading frames (ORFs) across medulloblastoma model systems. We demonstrate that these ORFs are commonly translated in medulloblastoma model systems and patient tumors, correlating with disease subtype. Using genome-wide CRISPR/Cas9 screens, we found that ORFs are frequently essential for cell survival in medulloblastoma and describe widespread reliance on upstream open reading frames (uORFs) in particular. From these, we identify a uORF in the ASNSD1 gene that is selectively upregulated and required for maintenance of cell survival by coordinating the function of the prefoldin-like complex, a poorly understood complex implicated in post-translational control. Together, our findings provide a blueprint for oncogenic uORFs as critical disease mediators both in medulloblastoma and, by extension, human cancers more broadly.
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spelling pubmed-102599822023-06-13 MDB-32. TRANSLATION OF NON-CANONICAL OPEN READING FRAMES AS A CANCER CELL SURVIVAL MECHANISM IN CHILDHOOD MEDULLOBLASTOMA Hofman, Damon Ruiz-Orera, Jorge Yannuzzi, Ian Murugesan, Rakesh van Dinter, Jip Clauser, Karl Condurat, Alexandra Herman, Amy Shanmugam, Vignesh Zhou, Kevin Vogelzang, Jayne Wang, Li Roth, Jennifer Ligon, Keith Phoenix, Timothy Root, David Golub, Todd Bandopadhayay, Pratiti van Heesch, Sebastiaan Prensner, John Neuro Oncol Final Category: Medulloblastomas - MDB High-risk medulloblastoma is one of the most recalcitrant pediatric cancers, and children with MYC-amplified disease frequently succumb to relapsed disease. Extensive analyses of the coding genome in this disease have characterized additional somatic events in some subsets of patients, though most tumors lack targetable mutations and do not yield insights regarding their aggressive behavior. At the same time, medulloblastoma is known to exhibit extensive rewiring of translational control in MYC-driven tumors, consistent with recent genetic evidence that the impact of this transcription factor on control of mRNA translation may be the most critical aspect of its function during tumorigenesis. Therefore, to propose previously unknown mechanisms for this disease, we have investigated the functional impact of translation of non-canonical open reading frames (ORFs) across medulloblastoma model systems. We demonstrate that these ORFs are commonly translated in medulloblastoma model systems and patient tumors, correlating with disease subtype. Using genome-wide CRISPR/Cas9 screens, we found that ORFs are frequently essential for cell survival in medulloblastoma and describe widespread reliance on upstream open reading frames (uORFs) in particular. From these, we identify a uORF in the ASNSD1 gene that is selectively upregulated and required for maintenance of cell survival by coordinating the function of the prefoldin-like complex, a poorly understood complex implicated in post-translational control. Together, our findings provide a blueprint for oncogenic uORFs as critical disease mediators both in medulloblastoma and, by extension, human cancers more broadly. Oxford University Press 2023-06-12 /pmc/articles/PMC10259982/ http://dx.doi.org/10.1093/neuonc/noad073.264 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of the Society for Neuro-Oncology. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Final Category: Medulloblastomas - MDB
Hofman, Damon
Ruiz-Orera, Jorge
Yannuzzi, Ian
Murugesan, Rakesh
van Dinter, Jip
Clauser, Karl
Condurat, Alexandra
Herman, Amy
Shanmugam, Vignesh
Zhou, Kevin
Vogelzang, Jayne
Wang, Li
Roth, Jennifer
Ligon, Keith
Phoenix, Timothy
Root, David
Golub, Todd
Bandopadhayay, Pratiti
van Heesch, Sebastiaan
Prensner, John
MDB-32. TRANSLATION OF NON-CANONICAL OPEN READING FRAMES AS A CANCER CELL SURVIVAL MECHANISM IN CHILDHOOD MEDULLOBLASTOMA
title MDB-32. TRANSLATION OF NON-CANONICAL OPEN READING FRAMES AS A CANCER CELL SURVIVAL MECHANISM IN CHILDHOOD MEDULLOBLASTOMA
title_full MDB-32. TRANSLATION OF NON-CANONICAL OPEN READING FRAMES AS A CANCER CELL SURVIVAL MECHANISM IN CHILDHOOD MEDULLOBLASTOMA
title_fullStr MDB-32. TRANSLATION OF NON-CANONICAL OPEN READING FRAMES AS A CANCER CELL SURVIVAL MECHANISM IN CHILDHOOD MEDULLOBLASTOMA
title_full_unstemmed MDB-32. TRANSLATION OF NON-CANONICAL OPEN READING FRAMES AS A CANCER CELL SURVIVAL MECHANISM IN CHILDHOOD MEDULLOBLASTOMA
title_short MDB-32. TRANSLATION OF NON-CANONICAL OPEN READING FRAMES AS A CANCER CELL SURVIVAL MECHANISM IN CHILDHOOD MEDULLOBLASTOMA
title_sort mdb-32. translation of non-canonical open reading frames as a cancer cell survival mechanism in childhood medulloblastoma
topic Final Category: Medulloblastomas - MDB
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10259982/
http://dx.doi.org/10.1093/neuonc/noad073.264
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