Accelerated nanopore basecalling with SLOW5 data format

MOTIVATION: Nanopore sequencing is emerging as a key pillar in the genomic technology landscape but computational constraints limiting its scalability remain to be overcome. The translation of raw current signal data into DNA or RNA sequence reads, known as ‘basecalling’, is a major friction in any...

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Detalles Bibliográficos
Autores principales: Samarakoon, Hiruna, Ferguson, James M, Gamaarachchi, Hasindu, Deveson, Ira W
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Original Paper
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10261880/
https://www.ncbi.nlm.nih.gov/pubmed/37252813
http://dx.doi.org/10.1093/bioinformatics/btad352

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10261880/
https://www.ncbi.nlm.nih.gov/pubmed/37252813
http://dx.doi.org/10.1093/bioinformatics/btad352

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