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Big versus small: The impact of aggregate size in disease

Protein aggregation results in an array of different size soluble oligomers and larger insoluble fibrils. Insoluble fibrils were originally thought to cause neuronal cell deaths in neurodegenerative diseases due to their prevalence in tissue samples and disease models. Despite recent studies demonst...

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Autores principales: Hnath, Brianna, Chen, Jiaxing, Reynolds, Joshua, Choi, Esther, Wang, Jian, Zhang, Dongyan, Sha, Congzhou M., Dokholyan, Nikolay V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10273386/
https://www.ncbi.nlm.nih.gov/pubmed/37243896
http://dx.doi.org/10.1002/pro.4686
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author Hnath, Brianna
Chen, Jiaxing
Reynolds, Joshua
Choi, Esther
Wang, Jian
Zhang, Dongyan
Sha, Congzhou M.
Dokholyan, Nikolay V.
author_facet Hnath, Brianna
Chen, Jiaxing
Reynolds, Joshua
Choi, Esther
Wang, Jian
Zhang, Dongyan
Sha, Congzhou M.
Dokholyan, Nikolay V.
author_sort Hnath, Brianna
collection PubMed
description Protein aggregation results in an array of different size soluble oligomers and larger insoluble fibrils. Insoluble fibrils were originally thought to cause neuronal cell deaths in neurodegenerative diseases due to their prevalence in tissue samples and disease models. Despite recent studies demonstrating the toxicity associated with soluble oligomers, many therapeutic strategies still focus on fibrils or consider all types of aggregates as one group. Oligomers and fibrils require different modeling and therapeutic strategies, targeting the toxic species is crucial for successful study and therapeutic development. Here, we review the role of different‐size aggregates in disease, and how factors contributing to aggregation (mutations, metals, post‐translational modifications, and lipid interactions) may promote oligomers opposed to fibrils. We review two different computational modeling strategies (molecular dynamics and kinetic modeling) and how they are used to model both oligomers and fibrils. Finally, we outline the current therapeutic strategies targeting aggregating proteins and their strengths and weaknesses for targeting oligomers versus fibrils. Altogether, we aim to highlight the importance of distinguishing the difference between oligomers and fibrils and determining which species is toxic when modeling and creating therapeutics for protein aggregation in disease.
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spelling pubmed-102733862023-07-01 Big versus small: The impact of aggregate size in disease Hnath, Brianna Chen, Jiaxing Reynolds, Joshua Choi, Esther Wang, Jian Zhang, Dongyan Sha, Congzhou M. Dokholyan, Nikolay V. Protein Sci Articles Protein aggregation results in an array of different size soluble oligomers and larger insoluble fibrils. Insoluble fibrils were originally thought to cause neuronal cell deaths in neurodegenerative diseases due to their prevalence in tissue samples and disease models. Despite recent studies demonstrating the toxicity associated with soluble oligomers, many therapeutic strategies still focus on fibrils or consider all types of aggregates as one group. Oligomers and fibrils require different modeling and therapeutic strategies, targeting the toxic species is crucial for successful study and therapeutic development. Here, we review the role of different‐size aggregates in disease, and how factors contributing to aggregation (mutations, metals, post‐translational modifications, and lipid interactions) may promote oligomers opposed to fibrils. We review two different computational modeling strategies (molecular dynamics and kinetic modeling) and how they are used to model both oligomers and fibrils. Finally, we outline the current therapeutic strategies targeting aggregating proteins and their strengths and weaknesses for targeting oligomers versus fibrils. Altogether, we aim to highlight the importance of distinguishing the difference between oligomers and fibrils and determining which species is toxic when modeling and creating therapeutics for protein aggregation in disease. John Wiley & Sons, Inc. 2023-07-01 /pmc/articles/PMC10273386/ /pubmed/37243896 http://dx.doi.org/10.1002/pro.4686 Text en © 2023 The Authors. Protein Science published by Wiley Periodicals LLC on behalf of The Protein Society. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Articles
Hnath, Brianna
Chen, Jiaxing
Reynolds, Joshua
Choi, Esther
Wang, Jian
Zhang, Dongyan
Sha, Congzhou M.
Dokholyan, Nikolay V.
Big versus small: The impact of aggregate size in disease
title Big versus small: The impact of aggregate size in disease
title_full Big versus small: The impact of aggregate size in disease
title_fullStr Big versus small: The impact of aggregate size in disease
title_full_unstemmed Big versus small: The impact of aggregate size in disease
title_short Big versus small: The impact of aggregate size in disease
title_sort big versus small: the impact of aggregate size in disease
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10273386/
https://www.ncbi.nlm.nih.gov/pubmed/37243896
http://dx.doi.org/10.1002/pro.4686
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