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Big versus small: The impact of aggregate size in disease
Protein aggregation results in an array of different size soluble oligomers and larger insoluble fibrils. Insoluble fibrils were originally thought to cause neuronal cell deaths in neurodegenerative diseases due to their prevalence in tissue samples and disease models. Despite recent studies demonst...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10273386/ https://www.ncbi.nlm.nih.gov/pubmed/37243896 http://dx.doi.org/10.1002/pro.4686 |
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author | Hnath, Brianna Chen, Jiaxing Reynolds, Joshua Choi, Esther Wang, Jian Zhang, Dongyan Sha, Congzhou M. Dokholyan, Nikolay V. |
author_facet | Hnath, Brianna Chen, Jiaxing Reynolds, Joshua Choi, Esther Wang, Jian Zhang, Dongyan Sha, Congzhou M. Dokholyan, Nikolay V. |
author_sort | Hnath, Brianna |
collection | PubMed |
description | Protein aggregation results in an array of different size soluble oligomers and larger insoluble fibrils. Insoluble fibrils were originally thought to cause neuronal cell deaths in neurodegenerative diseases due to their prevalence in tissue samples and disease models. Despite recent studies demonstrating the toxicity associated with soluble oligomers, many therapeutic strategies still focus on fibrils or consider all types of aggregates as one group. Oligomers and fibrils require different modeling and therapeutic strategies, targeting the toxic species is crucial for successful study and therapeutic development. Here, we review the role of different‐size aggregates in disease, and how factors contributing to aggregation (mutations, metals, post‐translational modifications, and lipid interactions) may promote oligomers opposed to fibrils. We review two different computational modeling strategies (molecular dynamics and kinetic modeling) and how they are used to model both oligomers and fibrils. Finally, we outline the current therapeutic strategies targeting aggregating proteins and their strengths and weaknesses for targeting oligomers versus fibrils. Altogether, we aim to highlight the importance of distinguishing the difference between oligomers and fibrils and determining which species is toxic when modeling and creating therapeutics for protein aggregation in disease. |
format | Online Article Text |
id | pubmed-10273386 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-102733862023-07-01 Big versus small: The impact of aggregate size in disease Hnath, Brianna Chen, Jiaxing Reynolds, Joshua Choi, Esther Wang, Jian Zhang, Dongyan Sha, Congzhou M. Dokholyan, Nikolay V. Protein Sci Articles Protein aggregation results in an array of different size soluble oligomers and larger insoluble fibrils. Insoluble fibrils were originally thought to cause neuronal cell deaths in neurodegenerative diseases due to their prevalence in tissue samples and disease models. Despite recent studies demonstrating the toxicity associated with soluble oligomers, many therapeutic strategies still focus on fibrils or consider all types of aggregates as one group. Oligomers and fibrils require different modeling and therapeutic strategies, targeting the toxic species is crucial for successful study and therapeutic development. Here, we review the role of different‐size aggregates in disease, and how factors contributing to aggregation (mutations, metals, post‐translational modifications, and lipid interactions) may promote oligomers opposed to fibrils. We review two different computational modeling strategies (molecular dynamics and kinetic modeling) and how they are used to model both oligomers and fibrils. Finally, we outline the current therapeutic strategies targeting aggregating proteins and their strengths and weaknesses for targeting oligomers versus fibrils. Altogether, we aim to highlight the importance of distinguishing the difference between oligomers and fibrils and determining which species is toxic when modeling and creating therapeutics for protein aggregation in disease. John Wiley & Sons, Inc. 2023-07-01 /pmc/articles/PMC10273386/ /pubmed/37243896 http://dx.doi.org/10.1002/pro.4686 Text en © 2023 The Authors. Protein Science published by Wiley Periodicals LLC on behalf of The Protein Society. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Articles Hnath, Brianna Chen, Jiaxing Reynolds, Joshua Choi, Esther Wang, Jian Zhang, Dongyan Sha, Congzhou M. Dokholyan, Nikolay V. Big versus small: The impact of aggregate size in disease |
title | Big versus small: The impact of aggregate size in disease |
title_full | Big versus small: The impact of aggregate size in disease |
title_fullStr | Big versus small: The impact of aggregate size in disease |
title_full_unstemmed | Big versus small: The impact of aggregate size in disease |
title_short | Big versus small: The impact of aggregate size in disease |
title_sort | big versus small: the impact of aggregate size in disease |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10273386/ https://www.ncbi.nlm.nih.gov/pubmed/37243896 http://dx.doi.org/10.1002/pro.4686 |
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