Reconstructor: a COBRApy compatible tool for automated genome-scale metabolic network reconstruction with parsimonious flux-based gap-filling

MOTIVATION: Genome-scale metabolic network reconstructions (GENREs) are valuable for understanding cellular metabolism in silico. Several tools exist for automatic GENRE generation. However, these tools frequently (i) do not readily integrate with some of the widely-used suites of packaged methods a...

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Detalles Bibliográficos
Autores principales: Jenior, Matthew L, Glass, Emma M, Papin, Jason A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10275916/
https://www.ncbi.nlm.nih.gov/pubmed/37279743
http://dx.doi.org/10.1093/bioinformatics/btad367

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10275916/
https://www.ncbi.nlm.nih.gov/pubmed/37279743
http://dx.doi.org/10.1093/bioinformatics/btad367

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