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Metabolomics Analysis as a Tool to Measure Cobalt Neurotoxicity: An In Vitro Validation

In this study, cobalt neurotoxicity was investigated in human astrocytoma and neuroblastoma (SH-SY5Y) cells using proliferation assays coupled with LC–MS-based metabolomics and transcriptomics techniques. Cells were treated with a range of cobalt concentrations between 0 and 200 µM. The 3-(4,5-dimet...

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Autores principales: Alanazi, Ibrahim M., R. Alzahrani, Abdullah, Zughaibi, Torki A., Al-Asmari, Ahmed I., Tabrez, Shams, Henderson, Catherine, Watson, David, Grant, Mary Helen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10302852/
https://www.ncbi.nlm.nih.gov/pubmed/37367855
http://dx.doi.org/10.3390/metabo13060698
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author Alanazi, Ibrahim M.
R. Alzahrani, Abdullah
Zughaibi, Torki A.
Al-Asmari, Ahmed I.
Tabrez, Shams
Henderson, Catherine
Watson, David
Grant, Mary Helen
author_facet Alanazi, Ibrahim M.
R. Alzahrani, Abdullah
Zughaibi, Torki A.
Al-Asmari, Ahmed I.
Tabrez, Shams
Henderson, Catherine
Watson, David
Grant, Mary Helen
author_sort Alanazi, Ibrahim M.
collection PubMed
description In this study, cobalt neurotoxicity was investigated in human astrocytoma and neuroblastoma (SH-SY5Y) cells using proliferation assays coupled with LC–MS-based metabolomics and transcriptomics techniques. Cells were treated with a range of cobalt concentrations between 0 and 200 µM. The 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay revealed cobalt cytotoxicity and decreased cell metabolism in a dose and time-dependent manner was observed by metabolomics analysis, in both cell lines. Metabolomic analysis also revealed several altered metabolites particularly those related to DNA deamination and methylation pathways. One of the increased metabolites was uracil which can be generated from DNA deamination or fragmentation of RNA. To investigate the origin of uracil, genomic DNA was isolated and analyzed by LC–MS. Interestingly, the source of uracil, which is uridine, increased significantly in the DNA of both cell lines. Additionally, the results of the qRT-PCR showed an increase in the expression of five genes Mlh1, Sirt2, MeCP2, UNG, and TDG in both cell lines. These genes are related to DNA strand breakage, hypoxia, methylation, and base excision repair. Overall, metabolomic analysis helped reveal the changes induced by cobalt in human neuronal-derived cell lines. These findings could unravel the effect of cobalt on the human brain.
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spelling pubmed-103028522023-06-29 Metabolomics Analysis as a Tool to Measure Cobalt Neurotoxicity: An In Vitro Validation Alanazi, Ibrahim M. R. Alzahrani, Abdullah Zughaibi, Torki A. Al-Asmari, Ahmed I. Tabrez, Shams Henderson, Catherine Watson, David Grant, Mary Helen Metabolites Article In this study, cobalt neurotoxicity was investigated in human astrocytoma and neuroblastoma (SH-SY5Y) cells using proliferation assays coupled with LC–MS-based metabolomics and transcriptomics techniques. Cells were treated with a range of cobalt concentrations between 0 and 200 µM. The 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay revealed cobalt cytotoxicity and decreased cell metabolism in a dose and time-dependent manner was observed by metabolomics analysis, in both cell lines. Metabolomic analysis also revealed several altered metabolites particularly those related to DNA deamination and methylation pathways. One of the increased metabolites was uracil which can be generated from DNA deamination or fragmentation of RNA. To investigate the origin of uracil, genomic DNA was isolated and analyzed by LC–MS. Interestingly, the source of uracil, which is uridine, increased significantly in the DNA of both cell lines. Additionally, the results of the qRT-PCR showed an increase in the expression of five genes Mlh1, Sirt2, MeCP2, UNG, and TDG in both cell lines. These genes are related to DNA strand breakage, hypoxia, methylation, and base excision repair. Overall, metabolomic analysis helped reveal the changes induced by cobalt in human neuronal-derived cell lines. These findings could unravel the effect of cobalt on the human brain. MDPI 2023-05-27 /pmc/articles/PMC10302852/ /pubmed/37367855 http://dx.doi.org/10.3390/metabo13060698 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Alanazi, Ibrahim M.
R. Alzahrani, Abdullah
Zughaibi, Torki A.
Al-Asmari, Ahmed I.
Tabrez, Shams
Henderson, Catherine
Watson, David
Grant, Mary Helen
Metabolomics Analysis as a Tool to Measure Cobalt Neurotoxicity: An In Vitro Validation
title Metabolomics Analysis as a Tool to Measure Cobalt Neurotoxicity: An In Vitro Validation
title_full Metabolomics Analysis as a Tool to Measure Cobalt Neurotoxicity: An In Vitro Validation
title_fullStr Metabolomics Analysis as a Tool to Measure Cobalt Neurotoxicity: An In Vitro Validation
title_full_unstemmed Metabolomics Analysis as a Tool to Measure Cobalt Neurotoxicity: An In Vitro Validation
title_short Metabolomics Analysis as a Tool to Measure Cobalt Neurotoxicity: An In Vitro Validation
title_sort metabolomics analysis as a tool to measure cobalt neurotoxicity: an in vitro validation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10302852/
https://www.ncbi.nlm.nih.gov/pubmed/37367855
http://dx.doi.org/10.3390/metabo13060698
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