Scalable sequence database search using partitioned aggregated Bloom comb trees

MOTIVATION: The Sequence Read Archive public database has reached 45 petabytes of raw sequences and doubles its nucleotide content every 2 years. Although BLAST-like methods can routinely search for a sequence in a small collection of genomes, making searchable immense public resources accessible is...

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Detalles Bibliográficos
Autores principales: Marchet, Camille, Limasset, Antoine
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Genome Sequence Analysis
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10311332/
https://www.ncbi.nlm.nih.gov/pubmed/37387170
http://dx.doi.org/10.1093/bioinformatics/btad225

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10311332/
https://www.ncbi.nlm.nih.gov/pubmed/37387170
http://dx.doi.org/10.1093/bioinformatics/btad225

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