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Seeding with minimized subsequence

MOTIVATION: Modern methods for computation-intensive tasks in sequence analysis (e.g. read mapping, sequence alignment, genome assembly, etc.) often first transform each sequence into a list of short, regular-length seeds so that compact data structures and efficient algorithms can be employed to ha...

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Detalles Bibliográficos
Autores principales: Li, Xiang, Shi, Qian, Chen, Ke, Shao, Mingfu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10311335/
https://www.ncbi.nlm.nih.gov/pubmed/37387132
http://dx.doi.org/10.1093/bioinformatics/btad218