BBmix: a Bayesian beta-binomial mixture model for accurate genotyping from RNA-sequencing

MOTIVATION: While many pipelines have been developed for calling genotypes using RNA-sequencing (RNA-Seq) data, they all have adapted DNA genotype callers that do not model biases specific to RNA-Seq such as allele-specific expression (ASE). RESULTS: Here, we present Bayesian beta-binomial mixture m...

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Detalles Bibliográficos
Autores principales: Vigorito, Elena, Barton, Anne, Pitzalis, Costantino, Lewis, Myles J, Wallace, Chris
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Original Paper
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10318392/
https://www.ncbi.nlm.nih.gov/pubmed/37338536
http://dx.doi.org/10.1093/bioinformatics/btad393

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10318392/
https://www.ncbi.nlm.nih.gov/pubmed/37338536
http://dx.doi.org/10.1093/bioinformatics/btad393

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