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Xanthine oxidoreductase gene polymorphisms are associated with high risk of sepsis and organ failure
BACKGROUND: Sepsis and associated organ failures confer substantial morbidity and mortality. Xanthine oxidoreductase (XOR) is implicated in the development of tissue oxidative damage in a wide variety of respiratory and cardiovascular disorders including sepsis and sepsis-associated acute respirator...
Autores principales: | , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10324226/ https://www.ncbi.nlm.nih.gov/pubmed/37415141 http://dx.doi.org/10.1186/s12931-023-02481-8 |
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author | Gao, Li Rafaels, Nicholas Dudenkov, Tanda M. Damarla, Mahendra Damico, Rachel Maloney, James P. Moss, Marc Martin, Greg S. Sevransky, Jonathan Shanholtz, Carl Herr, Dan L. Garcia, Joe G.N. Hernandez-Beeftink, Tamara Villar, Jesús Flores, Carlos Beaty, Terri H. Brower, Roy Hassoun, Paul M. Barnes, Kathleen C. |
author_facet | Gao, Li Rafaels, Nicholas Dudenkov, Tanda M. Damarla, Mahendra Damico, Rachel Maloney, James P. Moss, Marc Martin, Greg S. Sevransky, Jonathan Shanholtz, Carl Herr, Dan L. Garcia, Joe G.N. Hernandez-Beeftink, Tamara Villar, Jesús Flores, Carlos Beaty, Terri H. Brower, Roy Hassoun, Paul M. Barnes, Kathleen C. |
author_sort | Gao, Li |
collection | PubMed |
description | BACKGROUND: Sepsis and associated organ failures confer substantial morbidity and mortality. Xanthine oxidoreductase (XOR) is implicated in the development of tissue oxidative damage in a wide variety of respiratory and cardiovascular disorders including sepsis and sepsis-associated acute respiratory distress syndrome (ARDS). We examined whether single nucleotide polymorphisms (SNPs) in the XDH gene (encoding XOR) might influence susceptibility to and outcome in patients with sepsis. METHODS: We genotyped 28 tag SNPs in XDH gene in the CELEG cohort, including 621 European American (EA) and 353 African American (AA) sepsis patients. Serum XOR activity was measured in a subset of CELEG subjects. Additionally, we assessed the functional effects of XDH variants utilizing empirical data from different integrated software tools and datasets. RESULTS: Among AA patients, six intronic variants (rs206805, rs513311, rs185925, rs561525, rs2163059, rs13387204), in a region enriched with regulatory elements, were associated with risk of sepsis (P < 0.008–0.049). Two out of six SNPs (rs561525 and rs2163059) were associated with risk of sepsis-associated ARDS in an independent validation cohort (GEN-SEP) of 590 sepsis patients of European descent. Two common SNPs (rs1884725 and rs4952085) in tight linkage disequilibrium (LD) provided strong evidence for association with increased levels of serum creatinine (P(adjusted)<0.0005 and 0.0006, respectively), suggesting a role in increased risk of renal dysfunction. In contrast, among EA ARDS patients, the missense variant rs17011368 (I703V) was associated with enhanced mortality at 60-days (P < 0.038). We found higher serum XOR activity in 143 sepsis patients (54.5 ± 57.1 mU/mL) compared to 31 controls (20.9 ± 12.4 mU/mL, P = 1.96 × 10(− 13)). XOR activity was associated with the lead variant rs185925 among AA sepsis patients with ARDS (P < 0.005 and P(adjusted)<0.01). Multifaceted functions of prioritized XDH variants, as suggested by various functional annotation tools, support their potential causality in sepsis. CONCLUSIONS: Our findings suggest that XOR is a novel combined genetic and biochemical marker for risk and outcome in patients with sepsis and ARDS. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12931-023-02481-8. |
format | Online Article Text |
id | pubmed-10324226 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-103242262023-07-07 Xanthine oxidoreductase gene polymorphisms are associated with high risk of sepsis and organ failure Gao, Li Rafaels, Nicholas Dudenkov, Tanda M. Damarla, Mahendra Damico, Rachel Maloney, James P. Moss, Marc Martin, Greg S. Sevransky, Jonathan Shanholtz, Carl Herr, Dan L. Garcia, Joe G.N. Hernandez-Beeftink, Tamara Villar, Jesús Flores, Carlos Beaty, Terri H. Brower, Roy Hassoun, Paul M. Barnes, Kathleen C. Respir Res Research BACKGROUND: Sepsis and associated organ failures confer substantial morbidity and mortality. Xanthine oxidoreductase (XOR) is implicated in the development of tissue oxidative damage in a wide variety of respiratory and cardiovascular disorders including sepsis and sepsis-associated acute respiratory distress syndrome (ARDS). We examined whether single nucleotide polymorphisms (SNPs) in the XDH gene (encoding XOR) might influence susceptibility to and outcome in patients with sepsis. METHODS: We genotyped 28 tag SNPs in XDH gene in the CELEG cohort, including 621 European American (EA) and 353 African American (AA) sepsis patients. Serum XOR activity was measured in a subset of CELEG subjects. Additionally, we assessed the functional effects of XDH variants utilizing empirical data from different integrated software tools and datasets. RESULTS: Among AA patients, six intronic variants (rs206805, rs513311, rs185925, rs561525, rs2163059, rs13387204), in a region enriched with regulatory elements, were associated with risk of sepsis (P < 0.008–0.049). Two out of six SNPs (rs561525 and rs2163059) were associated with risk of sepsis-associated ARDS in an independent validation cohort (GEN-SEP) of 590 sepsis patients of European descent. Two common SNPs (rs1884725 and rs4952085) in tight linkage disequilibrium (LD) provided strong evidence for association with increased levels of serum creatinine (P(adjusted)<0.0005 and 0.0006, respectively), suggesting a role in increased risk of renal dysfunction. In contrast, among EA ARDS patients, the missense variant rs17011368 (I703V) was associated with enhanced mortality at 60-days (P < 0.038). We found higher serum XOR activity in 143 sepsis patients (54.5 ± 57.1 mU/mL) compared to 31 controls (20.9 ± 12.4 mU/mL, P = 1.96 × 10(− 13)). XOR activity was associated with the lead variant rs185925 among AA sepsis patients with ARDS (P < 0.005 and P(adjusted)<0.01). Multifaceted functions of prioritized XDH variants, as suggested by various functional annotation tools, support their potential causality in sepsis. CONCLUSIONS: Our findings suggest that XOR is a novel combined genetic and biochemical marker for risk and outcome in patients with sepsis and ARDS. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12931-023-02481-8. BioMed Central 2023-07-06 2023 /pmc/articles/PMC10324226/ /pubmed/37415141 http://dx.doi.org/10.1186/s12931-023-02481-8 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Gao, Li Rafaels, Nicholas Dudenkov, Tanda M. Damarla, Mahendra Damico, Rachel Maloney, James P. Moss, Marc Martin, Greg S. Sevransky, Jonathan Shanholtz, Carl Herr, Dan L. Garcia, Joe G.N. Hernandez-Beeftink, Tamara Villar, Jesús Flores, Carlos Beaty, Terri H. Brower, Roy Hassoun, Paul M. Barnes, Kathleen C. Xanthine oxidoreductase gene polymorphisms are associated with high risk of sepsis and organ failure |
title | Xanthine oxidoreductase gene polymorphisms are associated with high risk of sepsis and organ failure |
title_full | Xanthine oxidoreductase gene polymorphisms are associated with high risk of sepsis and organ failure |
title_fullStr | Xanthine oxidoreductase gene polymorphisms are associated with high risk of sepsis and organ failure |
title_full_unstemmed | Xanthine oxidoreductase gene polymorphisms are associated with high risk of sepsis and organ failure |
title_short | Xanthine oxidoreductase gene polymorphisms are associated with high risk of sepsis and organ failure |
title_sort | xanthine oxidoreductase gene polymorphisms are associated with high risk of sepsis and organ failure |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10324226/ https://www.ncbi.nlm.nih.gov/pubmed/37415141 http://dx.doi.org/10.1186/s12931-023-02481-8 |
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