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Forces and energetics of the canonical tetrameric cation channel gating
The canonical gating mechanism of tetrameric cation channels involves the spreading of the pore-lining helices at the so-called bundle-crossing gate. Despite a wealth of structural information, we lack a physical description of the gating process. Here, I took advantage of an entropic polymer stretc...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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National Academy of Sciences
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10334803/ https://www.ncbi.nlm.nih.gov/pubmed/37399394 http://dx.doi.org/10.1073/pnas.2221616120 |
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author | Scheuring, Simon |
author_facet | Scheuring, Simon |
author_sort | Scheuring, Simon |
collection | PubMed |
description | The canonical gating mechanism of tetrameric cation channels involves the spreading of the pore-lining helices at the so-called bundle-crossing gate. Despite a wealth of structural information, we lack a physical description of the gating process. Here, I took advantage of an entropic polymer stretching physical model and MthK structures to derive the forces and energies involved in pore-domain gating. In MthK, the Ca(2+)-induced conformational change in the RCK domain alone opens the bundle-crossing gate through pulling via unfolded linkers. In the open conformation, the linkers serve as entropic springs between the RCK domain and bundle-crossing gate that store an elastic potential energy of 3.6k(B)T and exert 9.8 pN (piconewton) radial pulling force to keep the gate open. I further derive that the work to load the linkers to prime the channel for opening is up to 3.8k(B)T, exerting up to 15.5 pN to pull the bundle-crossing open. Opening of the bundle-crossing leads to a release of 3.3k(B)T spring potential energy. Thus, the closed/RCK-apo and the open/RCK-Ca(2+) conformations are separated by a barrier of several k(B)T. I discuss how these findings relate to the functional properties of MthK and suggest that given the architectural conservation of the helix–pore-loop–helix pore-domain among all tetrameric cation channels, these physical parameters might be quite general. |
format | Online Article Text |
id | pubmed-10334803 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | National Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-103348032023-07-12 Forces and energetics of the canonical tetrameric cation channel gating Scheuring, Simon Proc Natl Acad Sci U S A Biological Sciences The canonical gating mechanism of tetrameric cation channels involves the spreading of the pore-lining helices at the so-called bundle-crossing gate. Despite a wealth of structural information, we lack a physical description of the gating process. Here, I took advantage of an entropic polymer stretching physical model and MthK structures to derive the forces and energies involved in pore-domain gating. In MthK, the Ca(2+)-induced conformational change in the RCK domain alone opens the bundle-crossing gate through pulling via unfolded linkers. In the open conformation, the linkers serve as entropic springs between the RCK domain and bundle-crossing gate that store an elastic potential energy of 3.6k(B)T and exert 9.8 pN (piconewton) radial pulling force to keep the gate open. I further derive that the work to load the linkers to prime the channel for opening is up to 3.8k(B)T, exerting up to 15.5 pN to pull the bundle-crossing open. Opening of the bundle-crossing leads to a release of 3.3k(B)T spring potential energy. Thus, the closed/RCK-apo and the open/RCK-Ca(2+) conformations are separated by a barrier of several k(B)T. I discuss how these findings relate to the functional properties of MthK and suggest that given the architectural conservation of the helix–pore-loop–helix pore-domain among all tetrameric cation channels, these physical parameters might be quite general. National Academy of Sciences 2023-07-03 2023-07-11 /pmc/articles/PMC10334803/ /pubmed/37399394 http://dx.doi.org/10.1073/pnas.2221616120 Text en Copyright © 2023 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by/4.0/This open access article is distributed under Creative Commons Attribution License 4.0 (CC BY) (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Biological Sciences Scheuring, Simon Forces and energetics of the canonical tetrameric cation channel gating |
title | Forces and energetics of the canonical tetrameric cation channel gating |
title_full | Forces and energetics of the canonical tetrameric cation channel gating |
title_fullStr | Forces and energetics of the canonical tetrameric cation channel gating |
title_full_unstemmed | Forces and energetics of the canonical tetrameric cation channel gating |
title_short | Forces and energetics of the canonical tetrameric cation channel gating |
title_sort | forces and energetics of the canonical tetrameric cation channel gating |
topic | Biological Sciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10334803/ https://www.ncbi.nlm.nih.gov/pubmed/37399394 http://dx.doi.org/10.1073/pnas.2221616120 |
work_keys_str_mv | AT scheuringsimon forcesandenergeticsofthecanonicaltetramericcationchannelgating |